{"id":23270644,"url":"https://github.com/quantixed/superplotr","last_synced_at":"2026-03-07T18:06:15.374Z","repository":{"id":267856123,"uuid":"900481659","full_name":"quantixed/SuperPlotR","owner":"quantixed","description":"Making SuperPlots in R","archived":false,"fork":false,"pushed_at":"2025-07-15T14:15:44.000Z","size":9195,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-07-15T21:44:38.062Z","etag":null,"topics":["dataviz","ggplot","superplot"],"latest_commit_sha":null,"homepage":"https://quantixed.github.io/SuperPlotR/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/quantixed.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS.md","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2024-12-08T21:49:03.000Z","updated_at":"2025-07-15T13:58:10.000Z","dependencies_parsed_at":"2024-12-12T21:30:57.086Z","dependency_job_id":"bb2c119b-8724-422d-8c52-35132649c8ab","html_url":"https://github.com/quantixed/SuperPlotR","commit_stats":{"total_commits":13,"total_committers":1,"mean_commits":13.0,"dds":0.0,"last_synced_commit":"0baa03e1295221d516812cb889fbe4e095010fbb"},"previous_names":["quantixed/superplotr"],"tags_count":3,"template":false,"template_full_name":null,"purl":"pkg:github/quantixed/SuperPlotR","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/quantixed%2FSuperPlotR","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/quantixed%2FSuperPlotR/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/quantixed%2FSuperPlotR/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/quantixed%2FSuperPlotR/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/quantixed","download_url":"https://codeload.github.com/quantixed/SuperPlotR/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/quantixed%2FSuperPlotR/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":30225560,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-03-07T17:00:40.062Z","status":"ssl_error","status_checked_at":"2026-03-07T17:00:39.026Z","response_time":53,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.6:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["dataviz","ggplot","superplot"],"created_at":"2024-12-19T18:53:15.387Z","updated_at":"2026-03-07T18:06:15.369Z","avatar_url":"https://github.com/quantixed.png","language":"R","readme":"---\noutput: github_document\n---\n\n\u003c!-- README.md is generated from README.Rmd. Please edit that file --\u003e\n\n```{r, include = FALSE}\nknitr::opts_chunk$set(\n  collapse = TRUE,\n  comment = \"#\u003e\",\n  fig.path = \"man/figures/README-\",\n  out.width = \"100%\"\n)\n```\n\n# SuperPlotR \u003ca href=\"https://quantixed.github.io/SuperPlotR/\"\u003e\u003cimg src=\"man/figures/logo.png\" align=\"right\" height=\"139\" alt=\"SuperPlotR website\" /\u003e\u003c/a\u003e\n\n\u003c!-- badges: start --\u003e\n[![R-CMD-check](https://github.com/quantixed/SuperPlotR/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/quantixed/SuperPlotR/actions/workflows/R-CMD-check.yaml)\n[![DOI](https://zenodo.org/badge/900481659.svg)](https://doi.org/10.5281/zenodo.14606751)\n\u003c!-- badges: end --\u003e\n\nThe goal of SuperPlotR is to allow the user to easily generate SuperPlots in R.\n\nSuperPlots are a way to visualise data in a way that emphasises the experimental\nreproducibility.\nYou can read more about SuperPlots in the\n[original paper](https://doi.org/10.1083/jcb.202001064):\n\nLord, S.J., Velle, K.B., Mullins, R.D. \u0026 Fritz-Laylin, L.K. (2020)\n**SuperPlots: Communicating reproducibility and variability in cell biology.**\n_J. Cell Biol._ 219(6):e202001064\n\n## Installation\n\nYou can install the development version of SuperPlotR from [GitHub](https://github.com/) with:\n\n``` r\n# install.packages(\"devtools\")\ndevtools::install_github(\"quantixed/SuperPlotR\")\n```\n\n## Example\n\nA simple example of how to use SuperPlotR is shown below:\n\n```{r example}\nlibrary(SuperPlotR)\nsuperplot(lord_jcb, \"Speed\", \"Treatment\", \"Replicate\", ylab = \"Speed (µm/min)\")\n```\n\nThe data used in this example is included in the package and is from the original\npaper.\n\nTo generate a SuperPlot, you need a data frame that has at least three columns.\nThese columns are:\n\n1. the variable that is measured in the experiment,\n2. the experimental condition,\n3. the experimental repeat that the measurment comes from.\n\nThe `superplot` function takes the data frame, the names of these three columns,\nand is further customisable with additional arguments.\n\nSee `vignette(\"SuperPlotR\")` for more examples, or\n`vignette(\"advanced\")` for more advanced usage.\n\n## More information\n\nMy SuperPlot package for IGOR Pro is available\n[here](https://github.com/quantixed/SuperPlot)\n\nA popular web-based app for generating SuperPlots, developed by \n[Joachim Goedhart](https://github.com/JoachimGoedhart) is available\n[here](https://huygens.science.uva.nl/SuperPlotsOfData/)\n","funding_links":[],"categories":[],"sub_categories":[],"project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fquantixed%2Fsuperplotr","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fquantixed%2Fsuperplotr","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fquantixed%2Fsuperplotr/lists"}