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Explainer [here](https://quantixed.org/2021/12/06/line-up-waffle-plots-for-colocalisation-data/).\n\nIntended for visualisation of microscopy colocalization data. Instead of using Venn or Euler diagrams, waffle plots allow us to get a feel of object-based colocalisation (sometimes referred to as co-occupation).\n\n![img](img/allwafflePlotLayout.png)\n\n## Example\n\n```\nWaffleMaker(33,12,62,9,0)\nWaffleMaker(11,1,57,9,1)\nWaffleMaker(0,0,55,8,2)\nEqualiseWaffles() // makes all waffles the same size\nPXPUtils#MakeTheLayouts(\"wafflePlot\",0,6, alphaSort = 1, saveIt = 0)\n```\n\n## Alternative colour schemes\n\nAome alternative colour presets are available from the _Macros_ menu.\n\n### Green-Cyan-Magenta (GCM)\n\n![img](img/gcm.png)\n\n### Tol 1\n\n![img](img/tol1.png)\n\n### Tol 2\n\n![img](img/tol2.png)\n\n### Wong 1\n\n![img](img/wong1.png)\n\n### Wong 2\n\n![img](img/wong2.png)\n\n## Other symbols\n\nUsers can set whatever colour they prefer by selecting _Macros \u003e Waffle Colors \u003e User Selection_\n\nSymbols can be customised by clicking on the presets in _Macros \u003e Waffle Symbols_ or by selecting _Specify..._ in that sub-menu.\nInput is the symbol integer for graphs in Igor.\n\nThis is an example in the base colour set using \"filled squares\".\n\n![img](img/squares.png)\n\n## Requirements\n\n- `PXPUtils.ipf` - available [here](https://github.com/quantixed/PXPUtils) - to display waffles easily\n- Tested on Igor Pro 8 and 9, macOS\n","funding_links":[],"categories":[],"sub_categories":[],"project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fquantixed%2Fwaffleplots","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fquantixed%2Fwaffleplots","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fquantixed%2Fwaffleplots/lists"}