{"id":23219766,"url":"https://github.com/raminmh/worm-blogging","last_synced_at":"2025-04-05T15:12:26.800Z","repository":{"id":138976725,"uuid":"86053851","full_name":"raminmh/Worm-Blogging","owner":"raminmh","description":"Here, I include my thoughts about how does the brain of the worm give rise to remarkable behavioral plasticities ","archived":false,"fork":false,"pushed_at":"2017-09-18T08:04:20.000Z","size":7,"stargazers_count":4,"open_issues_count":1,"forks_count":1,"subscribers_count":3,"default_branch":"master","last_synced_at":"2025-02-11T11:53:21.799Z","etag":null,"topics":["biological-networks","celegans","complex-neural-networks","computational-neuroscience","dynamic-systems","modeling","simulation"],"latest_commit_sha":null,"homepage":"","language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/raminmh.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2017-03-24T10:02:47.000Z","updated_at":"2024-10-31T20:36:16.000Z","dependencies_parsed_at":"2023-09-25T00:57:42.427Z","dependency_job_id":null,"html_url":"https://github.com/raminmh/Worm-Blogging","commit_stats":{"total_commits":12,"total_committers":1,"mean_commits":12.0,"dds":0.0,"last_synced_commit":"61ce82d8ce872952f3301caf3c7afbb3c5767334"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/raminmh%2FWorm-Blogging","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/raminmh%2FWorm-Blogging/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/raminmh%2FWorm-Blogging/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/raminmh%2FWorm-Blogging/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/raminmh","download_url":"https://codeload.github.com/raminmh/Worm-Blogging/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":247353742,"owners_count":20925329,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["biological-networks","celegans","complex-neural-networks","computational-neuroscience","dynamic-systems","modeling","simulation"],"created_at":"2024-12-18T21:40:15.014Z","updated_at":"2025-04-05T15:12:26.781Z","avatar_url":"https://github.com/raminmh.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# Worm-Blogging\nHere, I include my thoughts on how the brain of the worm gives rise to remarkable behavioral plasticities.\n\n\n# Discussions on how the worm crawl\nInitially in a series of documents, I will discuss the role of the command-neurons, different types of motor neurons and their connectivity with the body-wall muscle cells. The ultimate goal is to derive a valid assumption on how the crawling happens in C. elegans and accordingly, simulate the response of the worm to a tap or touch stimulus. My justifications will be based on the connectome dataset provided for the adult hermaphrodite by the WormWiring. I will be investigating various neural circuits consisting of command neurons such as AVB and AVA, together with B-type, A-type, D-type and AS motor neurons including their connectivity to the muscles. The first discussion will be on a neural circuit comprised of AVB and B-type motor neurons.  I will then discuss D-type and AS motor neurons within the next discussion. Afterwards, I will include the body-wall muscles into the neural circuit and discuss in details the propagation of an AVB-excitation into the motor neurons and muscle cells. I will finally repeat such analyses with AVA command neuron and A-type motor neurons and explain the neural circuit's architecture. \n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Framinmh%2Fworm-blogging","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Framinmh%2Fworm-blogging","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Framinmh%2Fworm-blogging/lists"}