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This may help with identifying base images that work well for your\nuse case.\n\n# Installation\n\nUse the _Neurodocker_ Docker image (recommended):\n\n```shell\ndocker run --rm repronim/neurodocker:latest --help\n```\n\nThe Docker images were moved to [repronim/neurodocker](https://hub.docker.com/r/repronim/neurodocker) from [kaczmarj/neurodocker](https://hub.docker.com/r/kaczmarj/neurodocker).\n\n\nThis project can also be installed with `pip`:\n\n```shell\npip install neurodocker\nneurodocker --help\n```\n\nIf the `pip install` command above gives a permissions error, install as a non-root user:\n\n```shell\npip install --user neurodocker\n```\n\n_Note_: it is not yet possible to minimize Docker containers using the _Neurodocker_ Docker image.\n\n\n# Developer installation\n\nClone the repository and install in editable mode.\n\n```\ngit clone https://github.com/ReproNim/neurodocker\ncd neurodocker\npython -m pip install --no-cache-dir --editable .[all]\n```\n\nBefore committing changes, initialize `prek` with `prek install`, or `pre-commit` with `pre-commit install`. This will format code with each commit to keep the style consistent. _Neurodocker_ uses `ruff` for formatting.\n","funding_links":[],"categories":[],"sub_categories":[],"project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Frepronim%2Fneurodocker","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Frepronim%2Fneurodocker","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Frepronim%2Fneurodocker/lists"}