{"id":23442357,"url":"https://github.com/repronim/reproshell","last_synced_at":"2025-06-20T09:36:50.896Z","repository":{"id":70236742,"uuid":"186942723","full_name":"ReproNim/reproshell","owner":"ReproNim","description":"Shell (bash only ATM) configuration to facilitate reproducible research","archived":false,"fork":false,"pushed_at":"2019-06-06T13:08:09.000Z","size":7,"stargazers_count":0,"open_issues_count":3,"forks_count":1,"subscribers_count":8,"default_branch":"master","last_synced_at":"2025-04-09T21:48:54.373Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ReproNim.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2019-05-16T03:16:04.000Z","updated_at":"2019-05-16T03:43:04.000Z","dependencies_parsed_at":"2023-04-11T12:18:04.729Z","dependency_job_id":null,"html_url":"https://github.com/ReproNim/reproshell","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ReproNim%2Freproshell","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ReproNim%2Freproshell/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ReproNim%2Freproshell/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ReproNim%2Freproshell/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ReproNim","download_url":"https://codeload.github.com/ReproNim/reproshell/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":248119407,"owners_count":21050754,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-12-23T17:29:31.267Z","updated_at":"2025-04-09T21:49:03.442Z","avatar_url":"https://github.com/ReproNim.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# reproshell\nShell (bash only ATM) configuration to facilitate reproducible research\n\n# Perspective features\n\nAlthough some features are inspired by prototype implementation to be used within singularity container environments, they are applicable for any, even direct invocation.\n\n- **Deployment**\n  - [ ] could be used as a standalone configuration\n  - [ ] could be \"pluggable\", i.e. the shell configuration to use within containers and remote sessions while \"interfacing back\" various session artifacts (e.g., history)\n- **Features**, most of which should be configurable from outside (for \"pluggable\" mode of operation)\n  - [ ] **infinite shell history** (unless explicitly requested to be session only, e.g. within container run)\n  - [ ] **VCS support** (to show when under some VCS and in what branch/state it is)\n  - **avoidance of session/execution side-effects**\n   - [ ] isolated `/tmp`\n   - [ ] (optionally) isolated `$HOME`? so no side-effects from `~/.local` installations etc\n   - [ ] (optionally) sanitized environment variables\n  - **informative and pretty (to \u003e80% of users) prompt**\n   - PS1 should should\n    - [ ] show being under some container/conda/virtualenv environment\n    - [ ] show full current path\n    - [ ] show user (in particular when root)\n    - [ ] (may be) # of commands in the history\n   - additional \"pluggable\" indicators, such as \n    - [ ] being in a session traced by reprozip or reproman.\n    - [ ] being outside of a set of \"tracked\" directories (e.g., within `datalad run` execution)\n  - **integrations**\n   - [ ] `datalad containers-run` or ReproNim/containers to replace parts of the custom .bashrc/singularity_run prototype\n   - [ ] `reproman execute` and possibly `run` to provide consistent interface across wide range of resources\n   - Metrics collection\n    - [ ] could be the one to remind users whenever popularity-contest or our custom usage reporting facility is not enabled\n   - [ ] (may be) even activate/deactivate handling for pluggable indicators etc (e.g. to enable/disable tracing)\n   - [ ] could collect (and later aggregate/join) DueCredit reports from interim executions\n   - [ ] may be optionally could be made persistent via starting actual session under screen or tmux.  Then could come with some custom nice .screenrc settings to visualize current load/\n\nSo, some features (infinite history, VCS integration, may be color scheme) could be provided by bundling existing 3rd party projects.  The rest more custom\n\n## References\n- Recommended .bashrc to assist in facilitating moer efficient shell and bash history use and archival:  https://github.com/ReproNim/module-reproducible-basics/pull/26\n- Recording bash sessions history within git during interactive `datalad containers-run` https://github.com/ReproNim/containers/pull/9\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Frepronim%2Freproshell","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Frepronim%2Freproshell","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Frepronim%2Freproshell/lists"}