{"id":17592307,"url":"https://github.com/robertaboukhalil/wgsim-sandbox","last_synced_at":"2025-04-13T04:35:17.677Z","repository":{"id":128445303,"uuid":"348930686","full_name":"robertaboukhalil/wgsim-sandbox","owner":"robertaboukhalil","description":"API that simulates sequencing reads using wgsim, which was compiled from C to WebAssembly and runs as a Cloudflare Worker.","archived":false,"fork":false,"pushed_at":"2023-07-12T02:43:58.000Z","size":131,"stargazers_count":4,"open_issues_count":0,"forks_count":1,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-03-26T21:23:07.831Z","etag":null,"topics":["cloudflare","genomics","webassembly","wgsim","workers"],"latest_commit_sha":null,"homepage":"https://wgsim.sandbox.bio","language":"JavaScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/robertaboukhalil.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2021-03-18T03:37:34.000Z","updated_at":"2023-11-29T19:02:09.000Z","dependencies_parsed_at":null,"dependency_job_id":"4e99ba81-a590-453e-8dfe-1421adac0508","html_url":"https://github.com/robertaboukhalil/wgsim-sandbox","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/robertaboukhalil%2Fwgsim-sandbox","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/robertaboukhalil%2Fwgsim-sandbox/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/robertaboukhalil%2Fwgsim-sandbox/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/robertaboukhalil%2Fwgsim-sandbox/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/robertaboukhalil","download_url":"https://codeload.github.com/robertaboukhalil/wgsim-sandbox/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":248665157,"owners_count":21142118,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["cloudflare","genomics","webassembly","wgsim","workers"],"created_at":"2024-10-22T05:09:46.340Z","updated_at":"2025-04-13T04:35:17.652Z","avatar_url":"https://github.com/robertaboukhalil.png","language":"JavaScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"# wgsim Sandbox\n\nWebAssembly-powered [wgsim](https://github.com/lh3/wgsim) API, running on [Cloudflare Workers](https://workers.cloudflare.com/).\n\n## How to use wgsim Sandbox?\n\nYou can use the hosted version at [wgsim.sandbox.bio](https://wgsim.sandbox.bio).\n\n## How it works\n\nTo perform the simulations, this app runs the C tool [wgsim](https://github.com/lh3/wgsim) compiled to WebAssembly, and runs as a serverless function on [Cloudflare Workers](https://workers.cloudflare.com/). For details about the compilation from C to WebAssembly, see the [biowasm](https://github.com/biowasm/biowasm) project.\n\nSee [this article](https://robaboukhalil.medium.com/serverless-genomics-c412f4bed726) for details.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Frobertaboukhalil%2Fwgsim-sandbox","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Frobertaboukhalil%2Fwgsim-sandbox","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Frobertaboukhalil%2Fwgsim-sandbox/lists"}