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specky\n\n[![ci_badge](https://github.com/royfrancis/specky/workflows/deploy/badge.svg)](https://github.com/royfrancis/specky/actions?workflow=deploy)  [![linkcheck_badge](https://github.com/royfrancis/specky/workflows/linkcheck/badge.svg)](https://github.com/royfrancis/specky/actions?workflow=linkcheck)  [![lifecycle_badge](https://lifecycle.r-lib.org/articles/figures/lifecycle-experimental.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)\n\nQuarto website template for courses\n\n![Report home](preview-home.webp)\n\n![Report preview](preview-report.webp)\n\n![Slide preview](preview-slide.webp)\n\nFor a demo site and usage, see [here](https://royfrancis.github.io/specky).\n\n## Usage\n\n- Recommended quarto 1.6.43 or higher\n- To download and use a starter template, run in the terminal\n\n:exclamation: Demo files are not downloaded\n\n```\nquarto use template royfrancis/specky\n```\n\n- Render all html files into `docs` directory to make sure everything works as expected\n\n```\nquarto render\n```\n\n- Use `##` as the highest level heading.\n- Limited documentation is available on the [demo site](https://royfrancis.github.io/specky/home_contents.html) for customization\n\n## Showcase\n\nHere are a few examples of this template in action:\n\n- [Introduction to Bioinformatics using NGS data](https://nbisweden.github.io/workshop-ngsintro/2511/)\n- [Single-cell RNA-seq analysis](https://nbisweden.github.io/workshop-scRNAseq/)\n- [Tools for reproducible research](https://nbisweden.github.io/workshop-reproducible-research/)\n- [Advanced data visualization](https://nbisweden.github.io/workshop-data-visualization-r/2505/)\n\n## Acknowledgements\n\n- Built using [Quarto](https://quarto.org/)\n- Uses the [fontawesome extension](https://github.com/quarto-ext/fontawesome) for icons\n- Uses the [reveal-logo extension](https://github.com/royfrancis/reveal-logo) for logos in presentation \n\n---\n\n2025 • Roy Francis\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Froyfrancis%2Fspecky","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Froyfrancis%2Fspecky","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Froyfrancis%2Fspecky/lists"}