{"id":20810695,"url":"https://github.com/rscherrer/rscherrer","last_synced_at":"2026-05-07T10:38:26.146Z","repository":{"id":45629324,"uuid":"362956273","full_name":"rscherrer/rscherrer","owner":"rscherrer","description":"My profile page","archived":false,"fork":false,"pushed_at":"2024-03-18T15:51:59.000Z","size":1883,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-07-08T13:07:30.328Z","etag":null,"topics":["adaptation","color","cpp","evolution","genetics","genomics","groningen","machine-learning","mathematica","matlab","modeling","phd","programming","python","rstats","speciation","statistics"],"latest_commit_sha":null,"homepage":"","language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/rscherrer.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2021-04-29T21:52:28.000Z","updated_at":"2023-04-01T18:39:34.000Z","dependencies_parsed_at":"2024-11-17T20:34:50.096Z","dependency_job_id":"ccfe265d-7598-493e-b907-19f1a1a76cd5","html_url":"https://github.com/rscherrer/rscherrer","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/rscherrer/rscherrer","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rscherrer%2Frscherrer","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rscherrer%2Frscherrer/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rscherrer%2Frscherrer/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rscherrer%2Frscherrer/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rscherrer","download_url":"https://codeload.github.com/rscherrer/rscherrer/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rscherrer%2Frscherrer/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":267722583,"owners_count":24133952,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-07-29T02:00:12.549Z","response_time":2574,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["adaptation","color","cpp","evolution","genetics","genomics","groningen","machine-learning","mathematica","matlab","modeling","phd","programming","python","rstats","speciation","statistics"],"created_at":"2024-11-17T20:27:03.336Z","updated_at":"2026-05-07T10:38:26.142Z","avatar_url":"https://github.com/rscherrer.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"Hey there! \n\nI am a PhD candidate in **theoretical evolutionary biology** at the University of Groningen, in the Netherlands, where I have also been temporarily a lecturer in evolutionary biology and a scientific programmer. \n\nIn my work I make and play with computational models that describe the evolution of species, to help us understand a bit better how biological diversity is generated in the real world.\n\nEnjoy my code!\n\nCheers, Raph\n\n[\u003cimg src=\"icons/cpp.png\" height=\"50\"\u003e](https://cplusplus.com) [\u003cimg src=\"icons/python.png\" height=\"50\"\u003e](https://www.python.org) [\u003cimg src=\"icons/r.png\" height=\"50\"\u003e](https://r-project.org) [\u003cimg height=\"50\" src=\"https://cdn.simpleicons.org/wolframmathematica\" /\u003e](https://www.wolfram.com/mathematica/) [\u003cimg src=\"icons/matlab.png\" height=\"50\"\u003e](https://www.mathworks.com/products/matlab.html)\n\nP.S. Some repositories below might be private.\n\n### Software\n\n* [archgen](https://github.com/rscherrer/archgen): quantitative genetics dataset simulator\n* [binprint](https://github.com/rscherrer/binprint): C++ library to save many binary output files\n* [readpars](https://github.com/rscherrer/readpars): C++ library to read parameters from text files\n* [readsim](https://github.com/rscherrer/readsim): R package to efficiently read simulation data into R\n* [setupp](https://github.com/rscherrer/setupp): Cross-platform, modular C++ configuration setup\n* [simarray](https://github.com/rscherrer/simarray): Python script to generate many simulation folders\n\n### Research projects\n\n* [balance](https://github.com/rscherrer/balance): :mortar_board: quantifying the imbalance of phylogenies under protracted speciation\n* [boplume](https://github.com/rscherrer/boplume): :mortar_board: tempo and mode of plumage color evolution in birds-of-paradise\n* [brachypode](https://github.com/rscherrer/brachypode): :mortar_board: model of climate adaptation in a patchy landscape\n* [coral-networks](https://github.com/rscherrer/coral-networks): :handshake: analysis of resilience in symbiont communities on Caribbean coral reefs\n* [DAISIE2](https://github.com/rscherrer/DAISIE2): :handshake: re-implementing and augmenting a model of phylogenetic island biogeography\n* [dewlap](https://github.com/rscherrer/dewlap): :mortar_board: measuring dewlap color differences between habitats in _Anolis sagrei_\n* [dominican-lizards](https://github.com/rscherrer/dominican-lizards): :handshake: a study of sexual selection and evolvability in _Anolis_ lizards\n* [florida-lizards](https://github.com/rscherrer/florida-lizards): :handshake: a study of urban evolution in _Anolis_ lizards\n* [hemigene](https://github.com/rscherrer/hemigene): model to explain the evolution of supergenes and hemizygosity\n* [reschoice](https://github.com/rscherrer/reschoice): :mortar_board: model of eco-evolutionary branching under resource choice\n* [speciome](https://github.com/rscherrer/speciome): :mortar_board: a model of adaptive speciation with gene networks\n\n:mortar_board: = PhD chapter\n\n:handshake: = collaborative work (not main investigator)\n\n### Find me on\n\n* [ORCiD](https://orcid.org/0000-0002-1447-7630)\n* [University of Groningen](https://www.rug.nl/staff/r.scherrer/)\n* [ResearchGate](https://www.researchgate.net/profile/Raphael-Scherrer)\n* [LinkedIn](https://www.linkedin.com/in/rapha%C3%ABl-scherrer-5817a3bb/)\n\n### Email\n\n* raphael.scherrer@evobio.eu  \n* r.scherrer@rug.nl\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Frscherrer%2Frscherrer","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Frscherrer%2Frscherrer","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Frscherrer%2Frscherrer/lists"}