{"id":24529092,"url":"https://github.com/saezlab/omnipath_cytoscape","last_synced_at":"2025-07-11T20:07:52.241Z","repository":{"id":56445270,"uuid":"141298952","full_name":"saezlab/Omnipath_Cytoscape","owner":"saezlab","description":"a plug-in to access Omnipath from Cytoscape","archived":false,"fork":false,"pushed_at":"2020-09-06T19:25:49.000Z","size":11999,"stargazers_count":7,"open_issues_count":2,"forks_count":0,"subscribers_count":5,"default_branch":"master","last_synced_at":"2025-04-14T17:11:25.333Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://apps.cytoscape.org/apps/omnipath","language":"Java","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/saezlab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2018-07-17T14:11:04.000Z","updated_at":"2022-08-11T04:56:56.000Z","dependencies_parsed_at":"2022-08-15T18:50:46.527Z","dependency_job_id":null,"html_url":"https://github.com/saezlab/Omnipath_Cytoscape","commit_stats":null,"previous_names":[],"tags_count":4,"template":false,"template_full_name":null,"purl":"pkg:github/saezlab/Omnipath_Cytoscape","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/saezlab%2FOmnipath_Cytoscape","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/saezlab%2FOmnipath_Cytoscape/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/saezlab%2FOmnipath_Cytoscape/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/saezlab%2FOmnipath_Cytoscape/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/saezlab","download_url":"https://codeload.github.com/saezlab/Omnipath_Cytoscape/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/saezlab%2FOmnipath_Cytoscape/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":264890087,"owners_count":23678833,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-01-22T07:34:46.318Z","updated_at":"2025-07-11T20:07:52.213Z","avatar_url":"https://github.com/saezlab.png","language":"Java","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Omnipath_Cytoscape \n\nCopyright (C) 2019 Francesco Ceccarelli\n\nGNU-GLPv3:\nThis program is free software: you can redistribute it and/or modify it\nunder the terms of the GNU General Public License as published by the\nFree Software Foundation.\n\nThis program is distributed in the hope that it will be useful, but\nWITHOUT ANY WARRANTY; without even the implied warranty of\nMERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General\nPublic License for more details.\n\nA full copy of the GNU General Public License can be found on file\n[LICENSE.md](LICENSE.md). If not, see \u003chttp://www.gnu.org/licenses/\u003e.\n\n## Installation:\n\nYou can install OmniPath plug-in directly from the program's app manager, download it from [Cytoscape app store](http://apps.cytoscape.org/) or install it manually from this repository as follows:\n\n1. Download this repository or just the `.jar` file described in step 4\n2. Open Cytoscape and go to **Apps -\u003e App Manager** (it's highly recommended to uninstall previous version(s) beforehand, if any)\n3. Select **Install from File...**\n4. Browse the `Omnipath-X.Y.jar` file inside the `target/` folder on the repository (being **X.Y** the version you wish to install)\n5. Open the file\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsaezlab%2Fomnipath_cytoscape","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fsaezlab%2Fomnipath_cytoscape","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsaezlab%2Fomnipath_cytoscape/lists"}