{"id":18990143,"url":"https://github.com/scikit-image/euroscipy24-tutorial","last_synced_at":"2026-02-15T22:06:08.078Z","repository":{"id":253911477,"uuid":"844626533","full_name":"scikit-image/euroscipy24-tutorial","owner":"scikit-image","description":"scikit-image tutorial at EuroSciPy 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2024](https://pretalx.com/euroscipy-2024/talk/ZVBAKK/).\n\n\u003e [!IMPORTANT]  \n\u003e The tutorial is intended to be run in the browser. \\\n\u003e **[Open the online tutorial here](https://scikit-image.org/euroscipy24-tutorial/lab/index.html?path=00_start.ipynb)**!\n\n\n## Contributing\n\n### Run notebooks in local environment\n\nUpdating the notebooks is best accomplished inside a local environment.\nCreate a new virtual environment with Python 3.12 and install the dependencies into it with\n\n```shell\npython -m pip install -r requirements/local_dev.txt\n```\n\nIf you want to add a dependency to `local_dev.txt`, add it to the corresponding `local_dev.in` instead and run\n\n```shell\nuv pip compile -o requirements/local_dev.txt requirements/local_dev.in\n```\n\n\n### Build \u0026 serve website locally\n\nSetup the required dependencies with\n\n```shell\npython -m pip install -r requirements/jupyterlite.txt\n```\n\nThis repository stores the notebooks in markdown format with the help of [Jupytext](https://jupytext.readthedocs.io/en/latest/) which is not yet supported by JupyterLite.\nSo we need to convert the notebooks into the `ipynb` format with\n\n```shell\nfind tutorial/ -name \"*.md\" -exec jupytext --to ipynb {} \\;\n```\n\nthen build \u0026 serve the site:\n\n```shell\njupyter lite build --contents tutorial/\njupyter lite serve\n```\n\nIf you want to add a dependency to `jupyterlite.txt`, add it to the corresponding `jupyterlite.in` instead and run\n\n```shell\nuv pip compile -o requirements/jupyterlite.txt requirements/jupyterlite.in\n```\n\n\n## Acknowledgements\n\nBuilds on the original [scikit-image tutorials](https://github.com/scikit-image/skimage-tutorials), last years tutorial at [EuroSciPy 2023](https://github.com/glemaitre/euroscipy-2023-scikit-image) by Guillaume Lemaitre, and the [joined image analysis tutorial at SciPy 2024](https://github.com/scipy-2024-image-analysis/tutorial).\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fscikit-image%2Feuroscipy24-tutorial","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fscikit-image%2Feuroscipy24-tutorial","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fscikit-image%2Feuroscipy24-tutorial/lists"}