{"id":29303531,"url":"https://github.com/scverse/genomic-features","last_synced_at":"2025-07-07T01:08:56.514Z","repository":{"id":154207511,"uuid":"631903912","full_name":"scverse/genomic-features","owner":"scverse","description":"Genomic Features in Python from BioConductor's AnnotationHub","archived":false,"fork":false,"pushed_at":"2025-06-23T17:35:53.000Z","size":5833,"stargazers_count":22,"open_issues_count":27,"forks_count":5,"subscribers_count":4,"default_branch":"main","last_synced_at":"2025-06-23T18:40:05.179Z","etag":null,"topics":["genomics","python"],"latest_commit_sha":null,"homepage":"https://genomic-features.readthedocs.io","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/scverse.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":"docs/contributing.md","funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2023-04-24T09:57:22.000Z","updated_at":"2025-06-18T14:08:06.000Z","dependencies_parsed_at":null,"dependency_job_id":"a3d2c36c-a285-437c-a01c-db9a6d3dc5e5","html_url":"https://github.com/scverse/genomic-features","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/scverse/genomic-features","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fgenomic-features","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fgenomic-features/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fgenomic-features/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fgenomic-features/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/scverse","download_url":"https://codeload.github.com/scverse/genomic-features/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fgenomic-features/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":263996092,"owners_count":23541402,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["genomics","python"],"created_at":"2025-07-07T01:08:55.642Z","updated_at":"2025-07-07T01:08:56.509Z","avatar_url":"https://github.com/scverse.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# genomic-features\n\n[![Tests][badge-tests]][link-tests]\n[![Documentation][badge-docs]][link-docs]\n[![codecov](https://codecov.io/gh/scverse/genomic-features/branch/main/graph/badge.svg?token=6QXsZewze7)](https://codecov.io/gh/scverse/genomic-features)\n[![PyPI][badge-pypi]][link-pypi]\n\n[badge-tests]: https://img.shields.io/github/actions/workflow/status/scverse/genomic-features/test.yaml?branch=main\n[link-tests]: https://github.com/scverse/genomic-features/actions/workflows/test.yml\n[badge-docs]: https://img.shields.io/readthedocs/genomic-features\n[badge-pypi]: https://img.shields.io/pypi/v/genomic-features\n[link-pypi]: https://pypi.org/project/genomic-features\n\nGenomic annotations using BioConductor resources in Python.\n\n## Getting started\n\nCheck out the [documentation][link-docs], in particular the [basic tutorial][link-basic-usage] and [API docs][link-api].\n\n## Installation\n\nYou need to have Python 3.9 or newer installed on your system. If you don't have\nPython installed, we recommend installing [Mambaforge](https://github.com/conda-forge/miniforge#mambaforge).\n\nThere are several alternative options to install genomic-features:\n\n\u003c!--\n1) Install the latest release of `genomic-features` from `PyPI \u003chttps://pypi.org/project/genomic-features/\u003e`_:\n\n```bash\npip install genomic-features\n```\n--\u003e\n\n### Development install\n\nTo install the latest development version:\n\n```bash\npip install git+https://github.com/scverse/genomic-features.git@main\n```\n\n## Release notes\n\nSee the [changelog][changelog].\n\n## Contact\n\nFor questions and help requests, you can reach out in the [scverse discourse][scverse-discourse].\nIf you found a bug, please use the [issue tracker][issue-tracker].\n\n## Citation\n\n\u003e t.b.a\n\n[scverse-discourse]: https://discourse.scverse.org/\n[issue-tracker]: https://github.com/scverse/genomic-features/issues\n[changelog]: https://genomic-features.readthedocs.io/en/latest/changelog.html\n[link-docs]: https://genomic-features.readthedocs.io\n[link-api]: https://genomic-features.readthedocs.io/en/latest/api.html\n[link-basic-usage]: https://genomic-features.readthedocs.io/en/latest/notebooks/basic_usage.html\n\n[//]: # (numfocus-fiscal-sponsor-attribution)\n\ngenomic-features is part of the scverse® project ([website](https://scverse.org), [governance](https://scverse.org/about/roles)) and is fiscally sponsored by [NumFOCUS](https://numfocus.org/).\nIf you like scverse® and want to support our mission, please consider making a tax-deductible [donation](https://numfocus.org/donate-to-scverse) to help the project pay for developer time, professional services, travel, workshops, and a variety of other needs.\n\n\u003cdiv align=\"center\"\u003e\n\u003ca href=\"https://numfocus.org/project/scverse\"\u003e\n  \u003cimg\n    src=\"https://raw.githubusercontent.com/numfocus/templates/master/images/numfocus-logo.png\"\n    width=\"200\"\n  \u003e\n\u003c/a\u003e\n\u003c/div\u003e\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fscverse%2Fgenomic-features","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fscverse%2Fgenomic-features","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fscverse%2Fgenomic-features/lists"}