{"id":29303540,"url":"https://github.com/scverse/integration-testing","last_synced_at":"2026-02-10T04:33:15.289Z","repository":{"id":258532779,"uuid":"867675663","full_name":"scverse/integration-testing","owner":"scverse","description":"A repo for integration testing core packages against upstream core packages","archived":false,"fork":false,"pushed_at":"2026-01-23T12:22:08.000Z","size":103,"stargazers_count":0,"open_issues_count":8,"forks_count":0,"subscribers_count":5,"default_branch":"main","last_synced_at":"2026-01-24T03:47:54.983Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/scverse.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2024-10-04T14:03:34.000Z","updated_at":"2026-01-22T13:46:21.000Z","dependencies_parsed_at":"2024-10-19T12:55:37.024Z","dependency_job_id":"54ff397c-2ec5-4083-84d8-3c356c8326bb","html_url":"https://github.com/scverse/integration-testing","commit_stats":null,"previous_names":["scverse/integration-testing"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/scverse/integration-testing","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fintegration-testing","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fintegration-testing/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fintegration-testing/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fintegration-testing/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/scverse","download_url":"https://codeload.github.com/scverse/integration-testing/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fintegration-testing/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":29290991,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-02-10T03:42:42.660Z","status":"ssl_error","status_checked_at":"2026-02-10T03:42:41.897Z","response_time":65,"last_error":"SSL_read: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-07-07T01:08:57.852Z","updated_at":"2026-02-10T04:33:15.284Z","avatar_url":"https://github.com/scverse.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# scverse-integration-testing\n\nThis repository contains integration tests for the [scverse](https://github.com/scverse) core packages.\nWe currently do not accept ecosystem packages but may change our mind in the future.\n\n## Overview\n\nThe integration tests are run automatically via GitHub Actions on a daily schedule, as well as on pushes and pull requests to the `main` branch. The workflow installs each package, applies constraints, and runs the test suite to detect breaking changes early.\n\n## Tested Packages\n\nThe following packages are tested:\n- mudata\n- spatialdata\n- scirpy\n- muon\n- scanpy\n- squidpy\n- scvi-tools\n- pertpy\n- decoupler\n- SnapATAC2\n\n## How it Works\n\n- Each package is checked out and tested in isolation.\n- AnnData (from the main branch) is installed with test dependencies.\n- Constraints from [`constraints.txt`](constraints.txt) are applied to avoid known incompatibilities.\n- Failures are reported automatically, and issues are opened if the daily scheduled run fails.\n\nSee the workflow file at [`.github/workflows/integration-test.yml`](.github/workflows/integration-test.yml) for details.\n\n## License\n\nThis project is licensed under the [MIT License](LICENSE).\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fscverse%2Fintegration-testing","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fscverse%2Fintegration-testing","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fscverse%2Fintegration-testing/lists"}