{"id":18285017,"url":"https://github.com/seandavi/aisr-data-warehouse","last_synced_at":"2026-04-27T20:32:23.574Z","repository":{"id":136334749,"uuid":"385590598","full_name":"seandavi/aisr-data-warehouse","owner":"seandavi","description":"Animal Image Shared Resource PACS/Viewer","archived":false,"fork":false,"pushed_at":"2022-09-13T20:00:36.000Z","size":67,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-04-09T06:13:46.477Z","etag":null,"topics":["api","bigquery","clinical-information-system","dicom","dicom-files","gcp","image-analysis","pacs","radiology"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/seandavi.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2021-07-13T12:08:07.000Z","updated_at":"2023-04-04T19:19:34.000Z","dependencies_parsed_at":null,"dependency_job_id":"2be1bbd5-af6b-40ef-beec-88196963cc57","html_url":"https://github.com/seandavi/aisr-data-warehouse","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/seandavi/aisr-data-warehouse","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/seandavi%2Faisr-data-warehouse","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/seandavi%2Faisr-data-warehouse/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/seandavi%2Faisr-data-warehouse/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/seandavi%2Faisr-data-warehouse/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/seandavi","download_url":"https://codeload.github.com/seandavi/aisr-data-warehouse/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/seandavi%2Faisr-data-warehouse/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":32354567,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-04-27T20:07:02.737Z","status":"ssl_error","status_checked_at":"2026-04-27T20:07:00.910Z","response_time":128,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.5:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["api","bigquery","clinical-information-system","dicom","dicom-files","gcp","image-analysis","pacs","radiology"],"created_at":"2024-11-05T13:15:12.621Z","updated_at":"2026-04-27T20:32:23.559Z","avatar_url":"https://github.com/seandavi.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"## Technologies used\n\n- [Cloud Run serverless web platform](https://cloud.google.com/run)\n- [GCP DICOM, part of the HealthCare API](https://cloud.google.com/healthcare-api/docs/concepts/dicom)\n- [DICOM Deidentification API](https://cloud.google.com/healthcare-api/docs/how-tos/dicom-deidentify)\n- [Google Cloud Bigquery](https://cloud.google.com/bigquery)\n- [Google Cloud Storage](https://cloud.google.com/storage)\n- [Google Cloud PubSub](https://cloud.google.com/pubsub)\n- [OHIF Dicom Image Viewer](https://ohif.org/)\n\n## Usage\n\n1. Add an image to the dicom store\n\n``` sh\ncurl -X POST \\\n    -H \"Content-Type: application/dicom\" \\\n    -H \"Authorization: Bearer $(gcloud auth application-default print-access-token)\" \\\n    https://healthcare.googleapis.com/v1/projects/uccc-aisr/locations/us-central1/datasets/uccc-aisr-b67a21b/dicomStores/uccc-aisr-ba50ed5/dicomWeb/studies \\\n    --data-binary @0009.DCM\n```\n\n2. Pipeline runs\n- deidenfify\n- Register DICOM metadata in Bigquery\n\n3. Access images via OHIF browser\n\n\n## Architecture\n\n```\n./generate_arch_diagram.sh\n```\n\n![AISR Data Warehouse Architecture](architecture.svg)\n\n## Data Flow\n\n![AISR Data Warehouse Data Flow](dataflow.svg)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fseandavi%2Faisr-data-warehouse","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fseandavi%2Faisr-data-warehouse","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fseandavi%2Faisr-data-warehouse/lists"}