{"id":28525308,"url":"https://github.com/seqeralabs/node-red-seqera","last_synced_at":"2026-03-09T11:03:27.771Z","repository":{"id":290340250,"uuid":"974081359","full_name":"seqeralabs/node-red-seqera","owner":"seqeralabs","description":"Seqera Platform automation on 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unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["automation","bioinformatics","nextflow","node-red","seqera","workflow"],"created_at":"2025-06-09T11:30:36.580Z","updated_at":"2026-03-09T11:03:27.753Z","avatar_url":"https://github.com/seqeralabs.png","language":"JavaScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"\u003ch1\u003e\n\u003cpicture\u003e\n  \u003csource media=\"(prefers-color-scheme: dark)\" srcset=\"https://github.com/seqeralabs/node-red-seqera/raw/main/docs/img/logo-dark.svg\"\u003e\n  \u003csource media=\"(prefers-color-scheme: light)\" srcset=\"https://github.com/seqeralabs/node-red-seqera/raw/main/docs/img/logo.svg\"\u003e\n  \u003cimg src=\"https://github.com/seqeralabs/node-red-seqera/raw/main/docs/img/logo.svg\" alt=\"@seqera/node-red-seqera\"\u003e\n\u003c/picture\u003e\n\u003c/h1\u003e\n\n**A set of Node-RED nodes for interacting with Seqera Platform.**\n\n-   📚 Documentation: [https://seqeralabs.github.io/node-red-seqera/](https://seqeralabs.github.io/node-red-seqera/)\n-   \u003cimg alt=\"Node-RED icon\" src=\"docs/img/node-red-icon.svg\" width=15\u003e Node-RED Flows library: [@seqera/node-red-seqera](https://flows.nodered.org/node/@seqera/node-red-seqera)\n-   \u003cimg alt=\"npm icon\" src=\"docs/img/npm-icon.svg\" width=15\u003e npm package: [@seqera/node-red-seqera](https://www.npmjs.com/package/@seqera/node-red-seqera)\n-   \u003cimg alt=\"npm icon\" src=\"docs/img/favicon.svg\" width=15\u003e Seqera Platform: [https://seqera.io/platform/](https://seqera.io/platform/)\n\n\u003e [!IMPORTANT]\n\u003e This project is currently in preview and is not covered by Seqera support. Please submit any problems or feature requests as [GitHub issues](https://github.com/seqeralabs/node-red-seqera/issues).\n\nGives new Node-RED node types for your automation workflows, which are designed to work together:\n\n\u003cimg src=\"https://github.com/seqeralabs/node-red-seqera/raw/main/docs/img/nodes.png\" alt=\"@seqera/node-red-seqera nodes\" align=\"right\" width=\"400\" \u003e\n\n-   [Launch a workflow](https://seqeralabs.github.io/node-red-seqera/seqera_nodes/launch_workflow/)\n-   [Monitor a workflow](https://seqeralabs.github.io/node-red-seqera/seqera_nodes/monitor_workflow/)\n-   [Poll Workflows](https://seqeralabs.github.io/node-red-seqera/seqera_nodes/poll_workflows/)\n-   [Add Dataset](https://seqeralabs.github.io/node-red-seqera/seqera_nodes/add_dataset/)\n-   [List Files from Data Explorer](https://seqeralabs.github.io/node-red-seqera/seqera_nodes/list_files/)\n-   [Poll Data Link Files](https://seqeralabs.github.io/node-red-seqera/seqera_nodes/poll_files/)\n-   [Add a Seqera Studio](https://seqeralabs.github.io/node-red-seqera/seqera_nodes/add_studio/)\n-   [Monitor a Seqera Studio](https://seqeralabs.github.io/node-red-seqera/seqera_nodes/monitor_studio/)\n\n# Typical Use cases\n\n-   🛠️ Integration with events _coming from_ and _going to_ third-party services (AWS, Slack, and [\u003e5000 others](https://flows.nodered.org/search?type=node) supported by Node-RED)\n-   🎨 Link triggers and actions to build automation logic using a graphical builder\n-   🔗 Chain workflows, launching downstream automatically\n-   🪩 (Bonus) Use with [Home Assistant](https://community.home-assistant.io/t/home-assistant-community-add-on-node-red/55023) to make your office go into disco mode when a pipeline completes 🕺🏻 🎉\n\n## Examples\n\nThis package includes several example flows which you can import and repurpose:\n\n-   💡 **Simple launch \u0026 monitor**\n    -   Chan your first workflow Launch and Monitor nodes\n-   📂 **Launch on file upload**\n    -   Launch a pipeline run when new files are detected using Data Link polling\n-   ♻️ **Auto-resume on workflow failure**\n    -   Automatically resume failed workflows to recover from transient errors\n-   🔗 **Pipeline chaining**\n    -   Chain nf-core/rnaseq and nf-core/differentialabundance pipelines together\n-   🐛 👩🏻‍💻 **Studio on pipeline fail + Slack webhook**\n    -   Create a debugging Studio and send Slack notifications on workflow failure\n\n![pipeline chaining](docs/img/example_flow_04.png)\n\nUse via the Node-RED menu under _Import_ \u003e _Examples_ \u003e _@seqera/node-red-seqera_.\nSee the [example docs](https://seqeralabs.github.io/node-red-seqera/examples/) for more information.\n\n## Video tutorials\n\nPrefer video to text? Check out the [YouTube Playlist of tutorial videos](https://youtube.com/playlist?list=PL_mgzF8qwHud1pOSurWKO8eDJIqE-_NHi\u0026si=StMNRsyMa9JOjBa8), taking you through installation, Node-RED fundamentals and the different examples!\n\n\u003cdiv align=\"center\"\u003e\n\n[![YouTube tutorial playlist](docs/img/youtube-tutorials-introduction.png)](https://youtube.com/playlist?list=PL_mgzF8qwHud1pOSurWKO8eDJIqE-_NHi\u0026si=StMNRsyMa9JOjBa8)\n\n\u003c/div\u003e\n\n# Quick start\n\n\u003e [!NOTE]\n\u003e For more information, please read the [installation docs](https://seqeralabs.github.io/node-red-seqera/installation)\n\n## Seqera Studios\n\nThe fastest way to get started is by using [Seqera Studios](https://seqera.io/platform/studios/).\n\nAdd a new Studio with the _Template_ set to _Prebuilt container image_ and enter:\n\n```\nghcr.io/seqeralabs/node-red-seqera-studios:latest\n```\n\nMake sure that the studio is set to _Always keep the session running_.\n\nYour new Studio should launch with a complete Node-RED instance that's ready for you to customise and use with Seqera automation.\n\n## Within Node-RED\n\nAlternatively Node-RED can be installed just about anywhere. Once installed, grab the Seqera nodes by going to _File_ \u003e _Manage Palette_, then the _Install_ tab.\n\nSearch for `@seqera/node-red-seqera` (or just \"seqera\") and you should find this package. Click _Install_ and the nodes will be available.\n\n# Contributing\n\nContributions are welcome! If you'd like to contribute to this project, please see [CONTRIBUTING.md](CONTRIBUTING.md).\n\n# License\n\nApache-2.0 license\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fseqeralabs%2Fnode-red-seqera","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fseqeralabs%2Fnode-red-seqera","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fseqeralabs%2Fnode-red-seqera/lists"}