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Activate it with this command in your terminal\n\n  `source activate py35`\n\n* In your terminal, in the directory where you cloned this repository. Run this command\n\n  `jupyter notebook otu_data_viz.ipynb`\n    \n---\n\nA codebook is provided for the .csv file: I encourage you to go through the exercise [here.](http://77.235.253.122/tutorials/courses/16s-metabarcoding-analysis/) to generate the **0.16.cons.taxonomy.csv dataset**. Which was created by processing .fastq files obtained from *Mus musculus* with [Mothur](https://www.mothur.org/). Find the notebook [here.](https://nbviewer.jupyter.org/github/Shuyib/mouse_gut_OTU/blob/master/otu_data_viz.ipynb)\n\n\n \n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fshuyib%2Fmouse_gut_otu","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fshuyib%2Fmouse_gut_otu","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fshuyib%2Fmouse_gut_otu/lists"}