{"id":16535306,"url":"https://github.com/silmathoron/elif-madexp","last_synced_at":"2026-05-12T06:35:05.240Z","repository":{"id":97739369,"uuid":"240566920","full_name":"Silmathoron/elif-madexp","owner":"Silmathoron","description":"Energy-based neuronal models (eLIF and mAdExp)","archived":false,"fork":false,"pushed_at":"2021-09-17T09:04:59.000Z","size":30,"stargazers_count":0,"open_issues_count":0,"forks_count":1,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-01-14T01:43:02.456Z","etag":null,"topics":["brian","energy","modeling","nest","neuron","neuroscience","simulators"],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-2-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/Silmathoron.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2020-02-14T17:48:14.000Z","updated_at":"2021-06-23T15:40:03.000Z","dependencies_parsed_at":null,"dependency_job_id":"f4212090-4d50-4302-bea7-525170a1c6c9","html_url":"https://github.com/Silmathoron/elif-madexp","commit_stats":{"total_commits":7,"total_committers":3,"mean_commits":"2.3333333333333335","dds":0.4285714285714286,"last_synced_commit":"2555b3078c4106f79e3477a818a8f9d4ca76eccf"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Silmathoron%2Felif-madexp","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Silmathoron%2Felif-madexp/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Silmathoron%2Felif-madexp/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Silmathoron%2Felif-madexp/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Silmathoron","download_url":"https://codeload.github.com/Silmathoron/elif-madexp/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":241686902,"owners_count":20003127,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["brian","energy","modeling","nest","neuron","neuroscience","simulators"],"created_at":"2024-10-11T18:27:04.840Z","updated_at":"2026-05-12T06:35:05.176Z","avatar_url":"https://github.com/Silmathoron.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Energy-based models (eLIF and mAdExp)\n\n\n## Content\n\nThis repository contains implementations of the eLIF and mAdExp models\nfor BRIAN, NEST, and NEURON.\n\n\n## Installing the models\n\n### BRIAN\n\nJust install the BRIAN simulator via pip:\n\n    pip install --user brian2\n\n### NEST\n\n* Install NEST (see [here](https://nest-simulator.readthedocs.io/en/stable/installation/index.html#advanced-install))\n* Install NESTML using ``pip install nestml`` (this code requires NESTML \u003e= 4).\n* Then run ``python nestml/nestml_install.py`` to install the models.\n* See the [FAQ](https://man.sr.ht/~tfardet/elif-madexp/FAQ.md) if you encouter any issue.\n\n### NEURON\n\n* Download and install NEURON (see [here](https://www.neuron.yale.edu/neuron/download))\n* Compile the models via ``nrnivmodl elif.mod`` and\n  ``nrnivmodl madexp.mod``\n\n\n## Running the models\n\nOnce the installation of one of the simulators is done, you can run the\ncorresponding files:\n\n* ``elif_brian_impl.py`` or ``madexp_brian_impl.py`` for BRIAN\n* ``elif_nest_impl.py`` or ``madexp_nest_impl.py`` for NEST\n* ``elif_neuron_impl.py`` or ``madexp_neuron_impl.py`` for NEURON\n\nTo do this, you can call them with python using e.g.\n``python elif_brian_impl.py``.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsilmathoron%2Felif-madexp","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fsilmathoron%2Felif-madexp","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsilmathoron%2Felif-madexp/lists"}