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unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-10-25T15:49:07.267Z","updated_at":"2026-03-05T18:39:11.362Z","avatar_url":"https://github.com/SimonBoothroyd.png","language":"Python","readme":"# Interactive Plots with Molecular Annotations\n\n[![Test Status](https://github.com/simonboothroyd/plotmol/actions/workflows/ci.yaml/badge.svg?branch=main)](https://github.com/simonboothroyd/plotmol/actions/workflows/ci.yaml)\n[![codecov](https://codecov.io/gh/SimonBoothroyd/plotmol/branch/main/graph/badge.svg?token=Aa8STE8WBZ)](https://codecov.io/gh/SimonBoothroyd/plotmol)\n[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)\n\nThis framework provides a set of functionalities for creating interactive plots that are annotated with molecular \nstructures using the [`bokeh` library](https://docs.bokeh.org/en/latest/index.html).\n\n## Installation\n\nThe package and its dependencies can be installed using the `conda` package manager:\n\n```shell\nconda install -c conda-forge plotmol\n```\n\n## Getting Started\n\nSee the [examples](examples) directory for an example of this framework in use.\n\n## Development\n\nA development conda environment can be created and activated by running:\n\n```shell\nmake env\nconda activate plotmol\n```\n\nThe environment will include all example and development dependencies, including linters and testing apparatus.\n\nUnit / example tests can be run using:\n\n```shell\nmake test\nmake test-examples\n```\n\nThe codebase can be formatted by running:\n\n```shell\nmake format\n```\n\nor checked for lint with:\n\n```shell\nmake lint\n```\n\n## License\n\nThe main package is release under the [MIT license](LICENSE). \n\n## Copyright\n\nCopyright (c) 2023, Simon Boothroyd\n","funding_links":[],"categories":[],"sub_categories":[],"project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsimonboothroyd%2Fplotmol","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fsimonboothroyd%2Fplotmol","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsimonboothroyd%2Fplotmol/lists"}