{"id":19592914,"url":"https://github.com/soedinglab/coco","last_synced_at":"2026-06-12T12:31:27.244Z","repository":{"id":94860090,"uuid":"139560881","full_name":"soedinglab/CoCo","owner":"soedinglab","description":"Consensus Correction","archived":false,"fork":false,"pushed_at":"2022-04-23T16:44:08.000Z","size":15789,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":4,"default_branch":"master","last_synced_at":"2025-11-21T12:04:16.505Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"C++","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/soedinglab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2018-07-03T09:35:11.000Z","updated_at":"2023-11-22T13:45:27.000Z","dependencies_parsed_at":"2023-06-02T11:00:44.351Z","dependency_job_id":null,"html_url":"https://github.com/soedinglab/CoCo","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/soedinglab/CoCo","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FCoCo","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FCoCo/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FCoCo/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FCoCo/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/soedinglab","download_url":"https://codeload.github.com/soedinglab/CoCo/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FCoCo/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":34245217,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-05-26T15:22:16.424Z","status":"online","status_checked_at":"2026-06-12T02:00:06.859Z","response_time":109,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-11T08:37:24.058Z","updated_at":"2026-06-12T12:31:27.225Z","avatar_url":"https://github.com/soedinglab.png","language":"C++","funding_links":[],"categories":[],"sub_categories":[],"readme":"# CoCo\n\nCoCo is a software suite for different **Co**nsensus **Co**rrection applications using spaced k-mer count profiles of short reads or contigs. CoCo is open source GPL-licensed software implemented in C++.\n\n### Compile from source\nTo compile CoCo `git`, a `C++/11` capable compiler (e.g. `gcc 4.7+`, `clang 3.5+`) and `cmake` (3.10 or higher) are required. Afterwards, the CoCo binary will be located in the `build/` directory.\n\n      git clone https://github.com/soedinglab/CoCo.git\n      cd CoCo\n      git submodule update --init\n      mkdir build \u0026\u0026 cd build\n      cmake -DCMAKE_BUILD_TYPE=RELEASE -DCMAKE_INSTALL_PREFIX=. ..\n      make -j 4\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsoedinglab%2Fcoco","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fsoedinglab%2Fcoco","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsoedinglab%2Fcoco/lists"}