{"id":19592926,"url":"https://github.com/soedinglab/prosstt-scripts","last_synced_at":"2025-10-16T05:05:25.429Z","repository":{"id":94860352,"uuid":"122949297","full_name":"soedinglab/prosstt-scripts","owner":"soedinglab","description":null,"archived":false,"fork":false,"pushed_at":"2019-06-13T13:19:54.000Z","size":50430,"stargazers_count":0,"open_issues_count":0,"forks_count":1,"subscribers_count":5,"default_branch":"master","last_synced_at":"2025-01-09T06:51:24.916Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/soedinglab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2018-02-26T09:54:51.000Z","updated_at":"2019-06-13T13:20:00.000Z","dependencies_parsed_at":"2023-04-06T16:16:38.729Z","dependency_job_id":null,"html_url":"https://github.com/soedinglab/prosstt-scripts","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2Fprosstt-scripts","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2Fprosstt-scripts/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2Fprosstt-scripts/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2Fprosstt-scripts/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/soedinglab","download_url":"https://codeload.github.com/soedinglab/prosstt-scripts/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":240867429,"owners_count":19870405,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-11T08:37:30.939Z","updated_at":"2025-10-16T05:05:20.381Z","avatar_url":"https://github.com/soedinglab.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"### PROSSTT scripts\n\nPROSSTT (PRObabilistic Simulations of ScRNA-seq Tree-like Topologies) is a package with code for the simulation of scRNAseq data for dynamic processes such as cell differentiation. PROSSTT is open source GPL-licensed software implemented in Python (also see the [repository](https://github.com/soedinglab/prosstt/) and the [paper](https://www.biorxiv.org/content/early/2018/01/31/256941.1)).\n\nHere we present the Jupyter notebooks and the python code that were used for the analysis of scRNA-seq data and the fitting of hyperparameters (referenced in the Supplementary Material of the paper).","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsoedinglab%2Fprosstt-scripts","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fsoedinglab%2Fprosstt-scripts","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsoedinglab%2Fprosstt-scripts/lists"}