{"id":42060217,"url":"https://github.com/statgen/encore-client-r","last_synced_at":"2026-01-26T07:38:53.398Z","repository":{"id":90272785,"uuid":"347271109","full_name":"statgen/encore-client-r","owner":"statgen","description":"An R package to interact with the Encore analysis server","archived":false,"fork":false,"pushed_at":"2024-02-28T18:47:31.000Z","size":37,"stargazers_count":2,"open_issues_count":1,"forks_count":0,"subscribers_count":8,"default_branch":"main","last_synced_at":"2025-01-13T00:47:19.321Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/statgen.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null}},"created_at":"2021-03-13T04:24:25.000Z","updated_at":"2023-12-28T19:54:43.000Z","dependencies_parsed_at":null,"dependency_job_id":"51d03ffc-53cb-40b0-92dd-65f5823d94b8","html_url":"https://github.com/statgen/encore-client-r","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/statgen/encore-client-r","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/statgen%2Fencore-client-r","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/statgen%2Fencore-client-r/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/statgen%2Fencore-client-r/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/statgen%2Fencore-client-r/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/statgen","download_url":"https://codeload.github.com/statgen/encore-client-r/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/statgen%2Fencore-client-r/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":28769853,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-01-26T06:37:25.426Z","status":"ssl_error","status_checked_at":"2026-01-26T06:37:23.039Z","response_time":59,"last_error":"SSL_read: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2026-01-26T07:38:52.862Z","updated_at":"2026-01-26T07:38:53.393Z","avatar_url":"https://github.com/statgen.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"\n# Encore-client-R\n\n\u003c!-- badges: start --\u003e\n[![Lifecycle: experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://www.tidyverse.org/lifecycle/#experimental)\n\u003c!-- badges: end --\u003e\n\nThis is an R package that allows you to programmatically interact with the [Encore analysis server](https://encore.sph.umich.edu/).\n\nNote that this is a preliminary release. Functions\nmay change overtime and you should not write too much\ncode that depends on these behaviors just yet.\n\nCurrently most functions focus on interacting with existing jobs\nrather than creating new ones.\n\n## Installation\n\nYou can install the development version of this package with:\n\n``` r\nremotes::install_github(\"statgen/encore-client-r\")\n```\n\n## Example\n\nIn order to interact with Encore, you will need to \nsupply an Encore API access token. You can create\none of those at https://encore.sph.umich.edu/me/api-token\n\n``` r\nlibrary(encore)\n\n# First, set your access token\n# If you are using RStudio, run this and enter your token in the popup\n\nset_access_token()\n\n# Another option is to set an ENCORE_API_TOKEN environment variable.\n# This can be done at the command line before launching R or you\n# can set this value in a .Renviron file.\n#\n# Finally you can also choose to pass your token as a string \n# (but make sure not to share your token with others if you share\n# your scripts).\n#\n# Note your actual token will be much longer; this it not a valid token\n\nset_access_token(\"eyJhbGciOi9.eyJuYW1lIjoiRW5.e30XBiuDHBYDxSLT\")\n\n# After you set your token, you can interact with your job data\n\nmy_jobs \u003c- get_jobs()\nlast_job \u003c- head(my_jobs, 1)\n\nplot_manhattan(last_job)\ndownload_job_output(last_job)\n\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fstatgen%2Fencore-client-r","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fstatgen%2Fencore-client-r","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fstatgen%2Fencore-client-r/lists"}