{"id":26907375,"url":"https://github.com/stufield/pcapkg","last_synced_at":"2025-04-01T11:56:00.505Z","repository":{"id":283352815,"uuid":"865009939","full_name":"stufield/pcapkg","owner":"stufield","description":"This package contains the general functions necessary for the unsupervised exploratory analysis of high-dimensional proteomic data using Principal Component Analysis (PCA). 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Please edit that file --\u003e\n\n\n```{r setup, include = FALSE}\nSys.setlocale(\"LC_COLLATE\", \"en_US.UTF-8\") # ensure common sorting envir\nknitr::opts_chunk$set(\n  collapse = TRUE,\n  comment = \"#\u003e\",\n  fig.path = \"man/figures/README-\",\n  out.width = \"100%\"\n)\nver \u003c- desc::desc_get_version(\".\")\nver \u003c- paste0(\"https://img.shields.io/badge/Version-\", ver,\n              \"-success.svg?style=flat\u0026logo=github\")\n```\n\n\n# The `pckpkg` package\n\n\u003c!-- badges: start --\u003e\n![GitHub version](`r ver`)\n[![CRAN status](http://www.r-pkg.org/badges/version/pcapkg)](https://cran.r-project.org/package=pcapkg)\n[![R-CMD-check](https://github.com/stufield/pcapkg/workflows/R-CMD-check/badge.svg)](https://github.com/stufield/pcapkg/actions)\n[![](https://cranlogs.r-pkg.org/badges/grand-total/pcapkg)](https://cran.r-project.org/package=pcapkg)\n[![test coverage](https://codecov.io/gh/stufield/pcapkg/branch/main/graph/badge.svg)](https://app.codecov.io/gh/stufield/pcapkg?branch=main)\n[![lifecycle: stable](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://lifecycle.r-lib.org/articles/stages.html#stable)\n[![License: MIT](https://img.shields.io/badge/License-MIT-blue.svg)](https://choosealicense.com/licenses/mit/)\n\u003c!-- badges: end --\u003e\n\n\n\n## Overview\n\nThe `pcapkg` package contains the general functions necessary for the\nunsupervised exploratory analysis of high-dimensional proteimic data using\nPrincipal Component Analysis (PCA). The primary tools in this package are\ndedicated to either the calculation of principal components, or the\nvisualization of loadings and projections of those components.\n\n\n-----------------\n\n\n## Installation\n\nIt is possible to install a specific version of `pcapkg` \n\n```{r install-git, eval = FALSE}\n# current dev version\nremotes::install_github(\"stufield/pcapkg\")\n\n# or a specific version\nremotes::install_github(\"stufield/pcapkg@v0.0.1\")\n```\n\n\n-----------------\n\n\n## Usage\n\nTo load `pcapkg` simply make a call to `library()` as usual:\n\n```{r, eval = FALSE}\nlibrary(pcapkg)\n```\n\n\n## Help summary of the package\n\n```{r help, eval = FALSE}\nlibrary(help = pcapkg)\n```\n\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fstufield%2Fpcapkg","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fstufield%2Fpcapkg","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fstufield%2Fpcapkg/lists"}