{"id":13544133,"url":"https://github.com/swcarpentry/r-novice-inflammation","last_synced_at":"2025-04-02T14:30:25.228Z","repository":{"id":24765687,"uuid":"28178903","full_name":"swcarpentry/r-novice-inflammation","owner":"swcarpentry","description":"Programming with R","archived":false,"fork":false,"pushed_at":"2025-04-01T00:40:37.000Z","size":51106,"stargazers_count":162,"open_issues_count":38,"forks_count":393,"subscribers_count":76,"default_branch":"main","last_synced_at":"2025-04-01T01:31:31.761Z","etag":null,"topics":["carpentries","data-visualisation","data-visualization","data-wrangling","english","knitr","lesson","open-educational-resources","programming","r","rmarkdown","software-carpentry","stable"],"latest_commit_sha":null,"homepage":"http://swcarpentry.github.io/r-novice-inflammation/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/swcarpentry.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE.md","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null},"funding":{"github":["carpentries"],"custom":["https://www.zeffy.com/en-US/donation-form/donate-to-make-a-difference-7497"]}},"created_at":"2014-12-18T10:26:01.000Z","updated_at":"2025-03-22T08:14:05.000Z","dependencies_parsed_at":"2022-06-30T00:32:50.999Z","dependency_job_id":"c45f60e8-db08-46f2-a859-b0e47cfd7069","html_url":"https://github.com/swcarpentry/r-novice-inflammation","commit_stats":null,"previous_names":[],"tags_count":3,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/swcarpentry%2Fr-novice-inflammation","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/swcarpentry%2Fr-novice-inflammation/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/swcarpentry%2Fr-novice-inflammation/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/swcarpentry%2Fr-novice-inflammation/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/swcarpentry","download_url":"https://codeload.github.com/swcarpentry/r-novice-inflammation/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":246832053,"owners_count":20841100,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["carpentries","data-visualisation","data-visualization","data-wrangling","english","knitr","lesson","open-educational-resources","programming","r","rmarkdown","software-carpentry","stable"],"created_at":"2024-08-01T11:00:42.621Z","updated_at":"2025-04-02T14:30:24.808Z","avatar_url":"https://github.com/swcarpentry.png","language":"R","funding_links":["https://github.com/sponsors/carpentries","https://www.zeffy.com/en-US/donation-form/donate-to-make-a-difference-7497"],"categories":["Educational resources"],"sub_categories":["R \u0026 RStudio"],"readme":"[![Build and Deploy Website](https://github.com/swcarpentry/r-novice-inflammation/workflows/01%20Build%20and%20Deploy%20Site/badge.svg)](https://github.com/swcarpentry/r-novice-inflammation/actions/workflows/sandpaper-main.yaml)\n[![Create a Slack Account with us](https://img.shields.io/badge/Create_Slack_Account-The_Carpentries-071159.svg)](https://slack-invite.carpentries.org/)\n[![Slack Status](https://img.shields.io/badge/Slack_Channel-swc--r--inflammation-E01563.svg)](https://carpentries.slack.com/messages/C9WDPCMUG)\n\n# r-novice-inflammation\n\nbuild-and-deploy-readme-badge\n\n[The Carpentries](https://carpentries.org/) teach foundational coding, and data science skills to\nresearchers worldwide. This GitHub repository generates the Software Carpentry lesson website\n\"Introduction to R for non-programmers using inflammation data.\" The [lesson website can be viewed\nhere][online]. Making changes in this GitHub repository\nallows us to change the content of the lesson website.\n\nThe following people are maintainers for this lesson, and are responsible for determining which\nchanges to incorporate into the lesson:\n\n- [Rohit Goswami](https://carpentries.org/instructors/#HaoZeke) (@haozeke)\n- [Hugo Gruson](https://carpentries.org/instructors/#bisaloo) (@Bisaloo)\n- [Isaac Jennings](https://carpentries.org/maintainers/#isaac-jennings) (@isaac-jennings)\n\nAlumni:\n\n- [Daniel Chen](https://software-carpentry.org/team/#chen_daniel) (@chendaniely)\n- [Diya Das](https://diyadas.github.io) (@diyadas)\n- [Katrin Leinweber](https://carpentries.org/instructors/#katrinleinweber) (@katrinleinweber)\n\nThe goal of this lesson is to teach novice programmers to write modular code to\nperform a data analysis. R is used to teach these skills because it is a\ncommonly used programming language in many scientific disciplines. However, the\nemphasis is not on teaching every aspect of R, but instead on\nlanguage agnostic principles like automation with loops and encapsulation with\nfunctions (see [Best Practices for Scientific Computing][best-practices] to\nlearn more). This lesson is a translation of the [Python version][py],\nand is also available in [MATLAB].\n\nThe example used in this lesson analyzes a set of 12 data files with\ninflammation data collected from a trial for a new treatment for arthritis (the\ndata was simulated). Learners are shown how it is better to create a function\nand apply it to each of the 12 files using a loop instead of using copy-paste\nto analyze the 12 files individually.\n\n## Contributing\n\nWe value your contributions. How to contribute to this lesson is outlined in\n[CONTRIBUTING.md](https://github.com/swcarpentry/r-novice-inflammation/blob/master/CONTRIBUTING.md).\nIf you have questions about our contributing guidelines, please create a new issue in the [issues]\ntab and one of the maintainers will respond.\n\n## Getting Help\n\nPlease see [https://github.com/carpentries/lesson-example](https://github.com/carpentries/lesson-example)\nfor instructions on formatting, building, and submitting lessons,\nor run `make` in this directory for a list of helpful commands.\n\nIf you have questions or proposals, please send them to the [r-discuss] mailing list.\n\n[online]: https://swcarpentry.github.io/r-novice-inflammation/\n[best-practices]: https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1001745\n[py]: https://github.com/swcarpentry/python-novice-inflammation\n[MATLAB]: https://github.com/swcarpentry/matlab-novice-inflammation\n[issues]: https://github.com/swcarpentry/r-novice-inflammation/issues\n[r-discuss]: https://carpentries.topicbox.com/groups/discuss\n\n\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fswcarpentry%2Fr-novice-inflammation","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fswcarpentry%2Fr-novice-inflammation","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fswcarpentry%2Fr-novice-inflammation/lists"}