{"id":24129438,"url":"https://github.com/synbiodex/sboldesigner","last_synced_at":"2026-03-06T17:35:16.531Z","repository":{"id":50116369,"uuid":"47483932","full_name":"SynBioDex/SBOLDesigner","owner":"SynBioDex","description":"SBOL Designer Project","archived":false,"fork":false,"pushed_at":"2021-06-04T00:02:22.000Z","size":109662,"stargazers_count":27,"open_issues_count":32,"forks_count":8,"subscribers_count":11,"default_branch":"master","last_synced_at":"2024-04-15T00:09:26.545Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"Java","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/SynBioDex.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2015-12-06T04:46:13.000Z","updated_at":"2024-02-01T23:20:11.000Z","dependencies_parsed_at":"2022-09-02T20:11:28.801Z","dependency_job_id":null,"html_url":"https://github.com/SynBioDex/SBOLDesigner","commit_stats":null,"previous_names":[],"tags_count":9,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SynBioDex%2FSBOLDesigner","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SynBioDex%2FSBOLDesigner/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SynBioDex%2FSBOLDesigner/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SynBioDex%2FSBOLDesigner/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SynBioDex","download_url":"https://codeload.github.com/SynBioDex/SBOLDesigner/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":233526213,"owners_count":18689446,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-01-11T19:32:21.945Z","updated_at":"2025-09-18T22:32:46.645Z","avatar_url":"https://github.com/SynBioDex.png","language":"Java","funding_links":[],"categories":[],"sub_categories":[],"readme":"SBOL Designer\r\n=============\r\n\r\nSBOL designer allows you to visualize SBOL designs using SBOL visual icons, edit SBOL designs \r\nin a GUI, import genetic constructs from an SBOL parts registry, and save your design an SBOL file.\r\n\r\nRunning SBOL Designer stand-alone\r\n=================================\r\n\r\nSBOLDesigner requires Java 8 to be installed on your computer. To run SBOL designer, \r\nsimply double click the jar file, which can be downloaded from https://github.com/SynBioDex/SBOLDesigner/releases. If your OS does not support running Java applications by double clicking, you can run the designer from command-line by using the `java -jar \u003cjarFileName\u003e` command at a terminal where `jarFileName` will be the name of the SBOL Designer jar file you\r\ndownloaded.\r\n\r\nInstruction\r\n=============\r\n\r\nComprehensive instructions for using SBOLDesigner can be found here: https://sboldesigner.github.io/\r\n\r\nCompilation\r\n=================================\r\n\r\nIn order to build SBOLDesigner from source, type the following into a Windows shell or create an Eclipse Maven run configuration that has the following goals (excluding the \"mvn\") after cloning this repository:\r\nmvn clean install exec:java -Dexec.mainClass=\"edu.utah.ece.async.sboldesigner.sbol.editor.SBOLDesignerStandalone\" \u0026\u0026 mvn package\r\n\r\nCitation\r\n========\r\n\r\nM. Zhang, J. McLaughlin, A. Wipat, and C. Myers, [SBOLDesigner 2: An Intuitive Tool for Structural Genetic Design](https://pubs.acs.org/doi/abs/10.1021/acssynbio.6b00275), in ACS Synthetic Biology 6(7): 1150-1160, July 21, 2017.\r\n\r\nMore information\r\n================\r\n\r\nSee [http://github.com/SynBioDex/SBOLDesigner/](http://github.com/SynBioDex/SBOLDesigner/) for more information on SBOL designer. Send your questions and comments about SBOL Designer to [michael13162@gmail.com](mailto:michael13162@gmail.com).\r\n\r\nFor the previous version (unsupported) of SBOL Designer, see [http://github.com/clarkparsia/sbol/](http://github.com/clarkparsia/sbol/).\r\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsynbiodex%2Fsboldesigner","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fsynbiodex%2Fsboldesigner","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsynbiodex%2Fsboldesigner/lists"}