{"id":24129418,"url":"https://github.com/synbiodex/sboljs3","last_synced_at":"2026-02-26T03:08:36.493Z","repository":{"id":42197319,"uuid":"103769909","full_name":"SynBioDex/sboljs3","owner":"SynBioDex","description":"A library for the Synthetic Biology Open Language (SBOL) written in TypeScript, for JavaScript/TypeScript applications in the browser or node.js","archived":false,"fork":false,"pushed_at":"2023-07-03T01:17:46.000Z","size":1946,"stargazers_count":4,"open_issues_count":16,"forks_count":1,"subscribers_count":2,"default_branch":"master","last_synced_at":"2024-08-22T14:46:31.677Z","etag":null,"topics":["bioinformatics","biology","sbol","synbio"],"latest_commit_sha":null,"homepage":"","language":"TypeScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/SynBioDex.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2017-09-16T17:15:16.000Z","updated_at":"2024-02-01T23:21:11.000Z","dependencies_parsed_at":"2023-07-19T23:20:42.771Z","dependency_job_id":null,"html_url":"https://github.com/SynBioDex/sboljs3","commit_stats":null,"previous_names":["udp/sbolgraph"],"tags_count":1,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SynBioDex%2Fsboljs3","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SynBioDex%2Fsboljs3/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SynBioDex%2Fsboljs3/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SynBioDex%2Fsboljs3/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SynBioDex","download_url":"https://codeload.github.com/SynBioDex/sboljs3/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":233526189,"owners_count":18689444,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","biology","sbol","synbio"],"created_at":"2025-01-11T19:32:06.294Z","updated_at":"2025-09-18T22:32:44.208Z","avatar_url":"https://github.com/SynBioDex.png","language":"TypeScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"**sboljs3** is a library for the Synthetic Biology Open Language (SBOL) written in TypeScript, for JavaScript/TypeScript applications in the browser or node.js. \n\nsboljs3 is built on [rdfoo](https://github.com/udp/rdfoo), a library for creating object oriented RDF abstractions in TypeScript.  It can therefore be used in conjunction with other rdfoo abstractions.  For example, the PROV-O abstraction used by sboljs3 is provided by [rdfoo-prov](https://github.com/udp/rdfoo-prov).\n\n\n# Implemented so far\n\n* Reading and writing SBOL1, SBOL2, and SBOL3\n* Converting between SBOL1, SBOL2, and SBOL3\n* Reading (converting) FASTA and GenBank\n\n\n# Not implemented so far\n\n* Writing FASTA and GenBank\n* Validation\n\n\n\n# Citation\n\nIf you use this library in your work, please cite\n\n    @article{sboljs,\n      author = {McLaughlin, James Alastair and Myers, Chris J. and Zundel, Zach and Wilkinson, Nathan and Atallah, Christian and Wipat, Anil},\n      title = {sboljs: Bringing the Synthetic Biology Open Language to the Web Browser},\n      journal = {ACS Synthetic Biology},\n      volume = {8},\n      number = {1},\n      pages = {191-193},\n      year = {2019},\n      doi = {10.1021/acssynbio.8b00338},\n      URL = { https://doi.org/10.1021/acssynbio.8b00338 },\n      eprint = {  https://doi.org/10.1021/acssynbio.8b00338 }\n    }\n    \n    \n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsynbiodex%2Fsboljs3","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fsynbiodex%2Fsboljs3","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fsynbiodex%2Fsboljs3/lists"}