{"id":13637858,"url":"https://github.com/t-neumann/slamdunk","last_synced_at":"2025-05-03T15:31:17.428Z","repository":{"id":37664103,"uuid":"58466133","full_name":"t-neumann/slamdunk","owner":"t-neumann","description":"Streamlining SLAM-seq analysis with ultra-high sensitivity","archived":false,"fork":false,"pushed_at":"2024-05-22T00:25:52.000Z","size":41288,"stargazers_count":46,"open_issues_count":30,"forks_count":23,"subscribers_count":5,"default_branch":"master","last_synced_at":"2025-04-07T17:41:54.243Z","etag":null,"topics":["bioinformatics","computational-biology","docker-image","pypi","quant-seq","rna-seq","slamseq","transcription"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"agpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/t-neumann.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2016-05-10T14:01:11.000Z","updated_at":"2025-04-05T14:08:39.000Z","dependencies_parsed_at":"2024-04-30T13:13:55.800Z","dependency_job_id":null,"html_url":"https://github.com/t-neumann/slamdunk","commit_stats":{"total_commits":420,"total_committers":11,"mean_commits":38.18181818181818,"dds":0.519047619047619,"last_synced_commit":"cf9bbbdebcb86ca1cc0c60aa9ea268deb565cd25"},"previous_names":[],"tags_count":20,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/t-neumann%2Fslamdunk","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/t-neumann%2Fslamdunk/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/t-neumann%2Fslamdunk/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/t-neumann%2Fslamdunk/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/t-neumann","download_url":"https://codeload.github.com/t-neumann/slamdunk/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":252210780,"owners_count":21712271,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","computational-biology","docker-image","pypi","quant-seq","rna-seq","slamseq","transcription"],"created_at":"2024-08-02T01:00:35.722Z","updated_at":"2025-05-03T15:31:16.999Z","avatar_url":"https://github.com/t-neumann.png","language":"Python","funding_links":[],"categories":["Genomics"],"sub_categories":["Expression"],"readme":"\u003cimg src=\"http://t-neumann.github.io/slamdunk/images/slamdunk_logo_light.png\" width=\"300\" title=\"Slamdunk\"\u003e\n\n### Streamlining SLAM-Seq analysis with ultra-high sensitivity.\n\n[![GitHub release](https://img.shields.io/github/release/t-neumann/slamdunk.svg)](https://github.com/t-neumann/slamdunk/releases/latest)\n[![Travis CI](https://img.shields.io/travis/t-neumann/slamdunk.svg)](https://travis-ci.org/t-neumann/slamdunk)\n\n[![Docker Pulls](https://img.shields.io/docker/pulls/tobneu/slamdunk.svg)](https://hub.docker.com/r/tobneu/slamdunk)\n[![Docker Automated build](https://img.shields.io/docker/automated/tobneu/slamdunk.svg)](https://hub.docker.com/r/tobneu/slamdunk/builds/)\n\n[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat-square)](http://bioconda.github.io/recipes/slamdunk/README.html)\n[![Anaconda build](https://anaconda.org/bioconda/slamdunk/badges/version.svg\n)](https://anaconda.org/bioconda/slamdunk)\n[![Anaconda downloads](https://anaconda.org/bioconda/slamdunk/badges/downloads.svg\n)](https://anaconda.org/bioconda/slamdunk)\n\n[![PyPI release](https://img.shields.io/pypi/v/slamdunk.svg)](https://pypi.python.org/pypi/slamdunk)\n![Github Stars](https://img.shields.io/github/stars/t-neumann/slamdunk.svg?style=social\u0026label=Star)\n\n-----\n\n### Slamdunk documentation\n\nhttp://t-neumann.github.io/slamdunk\n\n### nf-core slamseq workflow\n\n[![nfcore/slamseq](https://github.com/nf-core/slamseq/raw/master/docs/images/nf-core-slamseq_logo.png)](https://nf-co.re/slamseq)\n\n### Please cite\n\nNeumann, T., Herzog, V. A., Muhar, M., Haeseler, von, A., Zuber, J., Ameres, S. L., \u0026 Rescheneder, P. (2019). [Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-2849-7). BMC Bioinformatics, 20(1), 258. http://doi.org/10.1186/s12859-019-2849-7\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ft-neumann%2Fslamdunk","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ft-neumann%2Fslamdunk","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ft-neumann%2Fslamdunk/lists"}