{"id":27004429,"url":"https://github.com/tacc/pandemicexercisetool","last_synced_at":"2026-02-05T22:07:30.354Z","repository":{"id":231558313,"uuid":"782064857","full_name":"TACC/PandemicExerciseTool","owner":"TACC","description":null,"archived":false,"fork":false,"pushed_at":"2024-12-20T19:19:20.000Z","size":23050,"stargazers_count":5,"open_issues_count":10,"forks_count":0,"subscribers_count":10,"default_branch":"main","last_synced_at":"2025-04-04T06:16:41.623Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"JavaScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/TACC.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-04-04T15:14:01.000Z","updated_at":"2025-01-23T21:31:50.000Z","dependencies_parsed_at":"2024-04-04T16:45:11.193Z","dependency_job_id":"83c2ff17-42f9-4b55-8435-7ffbe56cd402","html_url":"https://github.com/TACC/PandemicExerciseTool","commit_stats":null,"previous_names":["tacc/pandemicexercisetool"],"tags_count":4,"template":false,"template_full_name":null,"purl":"pkg:github/TACC/PandemicExerciseTool","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/TACC%2FPandemicExerciseTool","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/TACC%2FPandemicExerciseTool/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/TACC%2FPandemicExerciseTool/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/TACC%2FPandemicExerciseTool/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/TACC","download_url":"https://codeload.github.com/TACC/PandemicExerciseTool/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/TACC%2FPandemicExerciseTool/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274640942,"owners_count":25322847,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-11T02:00:13.660Z","response_time":74,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-04-04T06:16:47.218Z","updated_at":"2026-02-05T22:07:30.347Z","avatar_url":"https://github.com/TACC.png","language":"JavaScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Interactive Outbreak Simulator\nA Python Dash-based pandemic and epidemic simulation application that integrates with the \n[Pandemic Exercise Simulator](https://github.com/TACC/PandemicExerciseSimulator/) backend engine \nto model epidemics within all 50 US states + DC.\n\n## Features\n![Dashboard](assets/simulator_plotly.png)\n\u003cdl\u003e\n  \u003cdt\u003e\u003cstrong\u003eMultiple Models\u003c/strong\u003e\u003c/dt\u003e\n  \u003cdd\u003eDeterministic and stochastic compartmental, mechanistic models (SEIR, SEIRS, and SEATIRD)\u003c/dd\u003e\n\n  \u003cdt\u003e\u003cstrong\u003eInteractive Controls\u003c/strong\u003e\u003c/dt\u003e\n  \u003cdd\u003eConfigure disease parameters and initial cases for every county and age group\u003c/dd\u003e\n\n  \u003cdt\u003e\u003cstrong\u003eInterventions\u003c/strong\u003e\u003c/dt\u003e\n  \u003cdd\u003eModel non-pharmaceutical interventions and vaccination across age groups\u003c/dd\u003e\n\n  \u003cdt\u003e\u003cstrong\u003eUS Counties\u003c/strong\u003e\u003c/dt\u003e\n  \u003cdd\u003eInteractive maps with county-level visualizations\u003c/dd\u003e\n\n  \u003cdt\u003e\u003cstrong\u003eRealistic Subgroups\u003c/strong\u003e\u003c/dt\u003e\n  \u003cdd\u003ePopulation data from 2023 census stratified by age and high \u0026 low risk of severe outcome\u003c/dd\u003e\n\n  \u003cdt\u003e\u003cstrong\u003eReal-time Simulation\u003c/strong\u003e\u003c/dt\u003e\n  \u003cdd\u003eLive epidemic progression visualized on map and in time series\u003c/dd\u003e\n\n  \u003cdt\u003e\u003cstrong\u003eDocker Ready\u003c/strong\u003e\u003c/dt\u003e\n  \u003cdd\u003eComplete containerized deployment\u003c/dd\u003e\n\u003c/dl\u003e\n\n## Quick Start\n### Prerequisites\n- Docker and Docker Compose\n- 8GB+ RAM recommended\n- Ports 8000, 8050, 6379, 27017 available\n\n### One-Command Startup\nEnsure the Docker application is running in the background.\n```bash\ngit clone https://github.com/saroshaprasla/PandemicExerciseTool-Dash.git\ncd /your/path/to/PandemicExerciseTool-Dash\ndocker-compose -f docker-compose-dash.yml up --build -d\n```\nor using the Makefile\n```bash\nmake start\n```\n\n### Access the Application\n- **Main Application**: http://localhost:8050\n- **Backend API**: http://localhost:8000\n  - click `api/pet` to see parameters sent to backend engine each run\n\nTo check logs of containers find the container name or id, then print logs to your terminal window. \nThe `-f` flag will allow you to watch a log live. `Ctrl+C` will exit the log.\n```bash\ndocker ps\ndocker logs \u003ccontainer_name_or_id\u003e\ndocker logs -f \u003ccontainer_name_or_id\u003e\n```\n\n### End Application\n```bash\nmake stop\n```\nwhich is equivalent to running\n```bash\ndocker compose -f docker-compose.yml down\n```\n\n## Architecture\n\n![Workflow](assets/workflow.png)\n\n### Services\n- **dash-frontend** (Port 8050): Python Dash web application\n- **django-backend** (Port 8000): REST API and data management\n- **celery-worker**: Background simulation processing with backend engine\n- **mongo-db** (Port 27017): Simulation data storage\n- **redis** (Port 6379): Celery message broker and caching\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftacc%2Fpandemicexercisetool","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ftacc%2Fpandemicexercisetool","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftacc%2Fpandemicexercisetool/lists"}