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In particular, the\n\n-   [API documentation][link-api]\n\nand the tutorials:\n\n-   [Paired integration and query-to-reference mapping](https://multigrate.readthedocs.io/en/latest/notebooks/paired_integration_cite-seq.html) [![Open In Colab][badge-colab]](https://colab.research.google.com/github/theislab/multigrate/blob/main/docs/notebooks/paired_integration_cite-seq.ipynb)\n-   [Trimodal integration and query-to-reference mapping](https://multigrate.readthedocs.io/en/latest/notebooks/trimodal_integration.html) [![Open In Colab][badge-colab]](https://colab.research.google.com/github/theislab/multigrate/blob/main/docs/notebooks/trimodal_integration.ipynb)\n\n## Installation\n\nYou need to have Python 3.10 or newer installed on your system. We recommend installing [Mambaforge](https://github.com/conda-forge/miniforge#mambaforge).\n\nTo create and activate a new environment:\n\n```bash\nmamba create --name multigrate python=3.10\nmamba activate multigrate\n```\n\nNext, there are several alternative options to install multigrate:\n\n1. Install the latest release of `multigrate` from [PyPI][link-pypi]:\n\n```bash\npip install multigrate\n```\n\n2. Or install the latest development version:\n\n```bash\npip install git+https://github.com/theislab/multigrate.git@main\n```\n\n## Release notes\n\nSee the [changelog][changelog].\n\n## Contact\n\nIf you found a bug, please use the [issue tracker][issue-tracker].\n\n## Citation\n\n\u003e Anastasia Litinetskaya, Maiia Schulman, Fabiola Curion, Artur Szalata, Alireza Omidi, Mohammad Lotfollahi, and Fabian Theis. 2022. \"Integration and querying of multimodal single-cell data with PoE-VAE.\" _bioRxiv_. https://doi.org/10.1101/2022.03.16.484643.\n\n## Reproducibility\n\nCode and notebooks to reproduce the results from the paper are available at https://github.com/theislab/multigrate_reproducibility.\n\n[issue-tracker]: https://github.com/theislab/multigrate/issues\n[changelog]: https://multigrate.readthedocs.io/latest/changelog.html\n[link-docs]: https://multigrate.readthedocs.io\n[link-api]: https://multigrate.readthedocs.io/latest/api.html\n[link-pypi]: https://pypi.org/project/multigrate\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftheislab%2Fmultigrate","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ftheislab%2Fmultigrate","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftheislab%2Fmultigrate/lists"}