{"id":31805803,"url":"https://github.com/theislab/svaeligr","last_synced_at":"2025-10-11T02:58:44.741Z","repository":{"id":200451692,"uuid":"705514050","full_name":"theislab/svaeligr","owner":"theislab","description":"sVAE with learnable interventions","archived":false,"fork":false,"pushed_at":"2024-04-29T07:16:36.000Z","size":1943,"stargazers_count":3,"open_issues_count":0,"forks_count":0,"subscribers_count":3,"default_branch":"main","last_synced_at":"2024-12-30T12:46:55.767Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/theislab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2023-10-16T06:56:08.000Z","updated_at":"2024-11-13T03:03:05.000Z","dependencies_parsed_at":null,"dependency_job_id":"7224293c-9974-404c-8c6e-b0f7cf5e9ac3","html_url":"https://github.com/theislab/svaeligr","commit_stats":null,"previous_names":["theislab/svaeligr"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/theislab/svaeligr","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/theislab%2Fsvaeligr","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/theislab%2Fsvaeligr/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/theislab%2Fsvaeligr/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/theislab%2Fsvaeligr/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/theislab","download_url":"https://codeload.github.com/theislab/svaeligr/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/theislab%2Fsvaeligr/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":279005950,"owners_count":26084009,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-10-11T02:00:06.511Z","response_time":55,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-10-11T02:58:42.257Z","updated_at":"2025-10-11T02:58:44.732Z","avatar_url":"https://github.com/theislab.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# sVAE ligr\nAn extension of Spike-Slab Variational Autoencoder for causal representation learning with learnable interventions. \n\n![svae_ligr_graphical_abstract_transbg](https://github.com/theislab/svaeligr/assets/7257233/23d1cb8e-a7ea-4cdb-b932-da86ee76d379)\n\n\n### Installation\nDownload or clone this repository. Then from inside the folder simply run:\n```\npip install -e . \n```\n\n## User guide\nThe jupyter notebooks of this implementation were tested with the packages of the following version numbers:\n- python == 3.8\n- scvi-tools == 0.18.0\n- torchmetrics == 0.11.4\n- pandas == 1.5.3\n\n## References:\nThis work is based on the implementation of sVAE+ by Lopez et al. The original implementation can be found at: https://github.com/Genentech/sVAE/tree/main\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftheislab%2Fsvaeligr","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ftheislab%2Fsvaeligr","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftheislab%2Fsvaeligr/lists"}