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It is recommended to have at least 2 replicates per condition. For example one can use a control condition with a significantly reduced number of modifications such as a cell line for which a modification writing enzyme was knocked-down or knocked-out. Alternatively, on a smaller scale transcripts of interests could be synthesized in-vitro.\n\n**Full documentation is available at http://nanocompore.rna.rocks**\n\n[![Nanocompore](docs/pictures/worflow.png)](http://nanocompore.rna.rocks)\n\n## Companion repositories\n\n* [NanoCompore_pipeline](https://github.com/tleonardi/nanocompore_pipeline): Nextflow pipeline to preprocess data for NanoCompore\n* [Nanocompore_analysis](https://github.com/tleonardi/nanocompore_paper_analyses): Analyses performed with Nanocompore for the BioRxiv preprint\n* [NanopolishComp](https://github.com/tleonardi/NanopolishComp): Collapse Nanopolish eventalign output per kmer, required before running NanoCompore\n\n## Main authors\n\n* Tommaso Leonardi - tom {at} tleo.io\n* Adrien Leger - aleg {at} ebi.ac.uk\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftleonardi%2Fnanocompore","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ftleonardi%2Fnanocompore","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftleonardi%2Fnanocompore/lists"}