{"id":32174754,"url":"https://github.com/toolsforexperiments/plottr","last_synced_at":"2026-02-20T16:01:43.371Z","repository":{"id":37093237,"uuid":"132359448","full_name":"toolsforexperiments/plottr","owner":"toolsforexperiments","description":"A flexible plotting and data analysis tool.","archived":false,"fork":false,"pushed_at":"2025-10-09T09:02:01.000Z","size":3925,"stargazers_count":51,"open_issues_count":64,"forks_count":58,"subscribers_count":12,"default_branch":"master","last_synced_at":"2025-10-21T19:13:44.789Z","etag":null,"topics":["data-analysis","live-plotting","physics","plotting","pyqt","qcodes","science"],"latest_commit_sha":null,"homepage":"https://github.com/toolsforexperiments/plottr","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/toolsforexperiments.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2018-05-06T17:08:42.000Z","updated_at":"2025-10-09T08:39:14.000Z","dependencies_parsed_at":"2026-01-04T11:04:38.469Z","dependency_job_id":null,"html_url":"https://github.com/toolsforexperiments/plottr","commit_stats":{"total_commits":1285,"total_committers":34,"mean_commits":"37.794117647058826","dds":0.5346303501945525,"last_synced_commit":"a3ba5adf6522a3c841400f54308c980beb69172a"},"previous_names":[],"tags_count":23,"template":false,"template_full_name":null,"purl":"pkg:github/toolsforexperiments/plottr","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/toolsforexperiments%2Fplottr","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/toolsforexperiments%2Fplottr/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/toolsforexperiments%2Fplottr/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/toolsforexperiments%2Fplottr/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/toolsforexperiments","download_url":"https://codeload.github.com/toolsforexperiments/plottr/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/toolsforexperiments%2Fplottr/sbom","scorecard":{"id":894321,"data":{"date":"2025-08-11","repo":{"name":"github.com/toolsforexperiments/plottr","commit":"aadbe9e552e3a14addfb1467b0a42985d5df66a9"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":4,"checks":[{"name":"Code-Review","score":8,"reason":"Found 7/8 approved changesets -- score normalized to 8","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Dangerous-Workflow","score":10,"reason":"no dangerous workflow patterns detected","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Maintained","score":2,"reason":"2 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 2","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Token-Permissions","score":0,"reason":"detected GitHub workflow tokens with excessive permissions","details":["Warn: no topLevel permission defined: .github/workflows/python-app.yml:1","Warn: no topLevel permission defined: .github/workflows/python-release.yml:1","Info: no jobLevel write permissions found"],"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Pinned-Dependencies","score":0,"reason":"dependency not pinned by hash detected -- score normalized to 0","details":["Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/python-app.yml:25: update your workflow using https://app.stepsecurity.io/secureworkflow/toolsforexperiments/plottr/python-app.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/python-app.yml:27: update your workflow using https://app.stepsecurity.io/secureworkflow/toolsforexperiments/plottr/python-app.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/python-release.yml:14: update your workflow using https://app.stepsecurity.io/secureworkflow/toolsforexperiments/plottr/python-release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/python-release.yml:16: update your workflow using https://app.stepsecurity.io/secureworkflow/toolsforexperiments/plottr/python-release.yml/master?enable=pin","Warn: pipCommand not pinned by hash: .github/workflows/python-release.yml:22","Warn: pipCommand not pinned by hash: .github/workflows/python-release.yml:27","Info:   0 out of   4 GitHub-owned GitHubAction dependencies pinned","Info:   0 out of   2 pipCommand dependencies pinned"],"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE:0","Info: FSF or OSI recognized license: MIT License: LICENSE:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Signed-Releases","score":-1,"reason":"no releases found","details":null,"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"Branch-Protection","score":-1,"reason":"internal error: error during branchesHandler.setup: internal error: githubv4.Query: Resource not accessible by integration","details":null,"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 30 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}},{"name":"Vulnerabilities","score":2,"reason":"8 existing vulnerabilities detected","details":["Warn: Project is vulnerable to: PYSEC-2021-856 / GHSA-5545-2q6w-2gh6","Warn: Project is vulnerable to: GHSA-6p56-wp2h-9hxr","Warn: Project is vulnerable to: PYSEC-2019-108 / GHSA-9fq2-x9r6-wfmf","Warn: Project is vulnerable to: PYSEC-2021-857 / GHSA-f7c7-j99h-c22f","Warn: Project is vulnerable to: GHSA-fpfv-jqm9-f5jm","Warn: Project is vulnerable to: PYSEC-2017-1 / GHSA-frgw-fgh6-9g52","Warn: Project is vulnerable to: PYSEC-2020-73","Warn: Project is vulnerable to: PYSEC-2019-41 / GHSA-qfc5-mcwq-26q8"],"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}}]},"last_synced_at":"2025-08-24T13:06:00.593Z","repository_id":37093237,"created_at":"2025-08-24T13:06:00.593Z","updated_at":"2025-08-24T13:06:00.593Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":29656589,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-02-20T09:27:29.698Z","status":"ssl_error","status_checked_at":"2026-02-20T09:26:12.373Z","response_time":59,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.6:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["data-analysis","live-plotting","physics","plotting","pyqt","qcodes","science"],"created_at":"2025-10-21T19:08:40.228Z","updated_at":"2026-02-20T16:01:43.362Z","avatar_url":"https://github.com/toolsforexperiments.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# plottr: modular data plotting and processing\n\n[![PyPi version](https://badge.fury.io/py/plottr.svg)](https://badge.fury.io/py/plottr)\n[![PyPI python versions](https://img.shields.io/pypi/pyversions/plottr.svg)](https://pypi.python.org/pypi/plottr/)\n[![Docs](https://img.shields.io/badge/read%20-thedocs-ff66b4.svg)](https://plottr.readthedocs.io/en/latest/)\n[![Build on GitHub actions](https://github.com/toolsforexperiments/plottr/workflows/Python%20application/badge.svg?branch=master)](https://github.com/toolsforexperiments/plottr/actions)\n\nA framework for inspecting data, based on flowcharts from *pyqtgraph*.\n*plottr*'s main aim is to allow the user to define custom data processing flows and plotting.\nA particular use case is data filtering and plotting.\n\n## Documentation: \nhttps://plottr.readthedocs.io (work in progress...)\n\n# Quickstart\n\n## Installation\n\nPlottr is installable from pypi with `pip install plottr`\n\nPlottr requires either the PyQt5 or Pyside2 gui framework.\nTo install with PyQt5 or Pyside2 backend you can do\n``pip install plottr[PyQt5]`` or ``pip install plottr[Pyside2]`` \n\nNote that if  you have installed ``pyqt`` from ``(Ana)Conda`` you should not use any of these\ntargets but do ``pip install plottr`` or install Plottr from conda forge:\n\n```\nconda config --add channels conda-forge\nconda config --set channel_priority strict\nconda install plottr\n```\n\nTo install from source: clone the repo, and install using `pip install -e .`\n\n## inspectr: QCoDeS dataset inspection and (live) plotting\n\nYou can use the `inspectr` tool to get a simple overview over QCoDeS database\nfiles, and plot datasets contained in the database.\n\nTo use: run `plottr-inspectr [--dbpath \u003cpath to your .db file\u003e]` \n \nAs an alternative from the root of the cloned plottr repository, run `python apps/inspectr.py [--dbpath \u003cpath to your .db file\u003e]`\n\nFor basic instructions, check out the Notebook *Live plotting qcodes data* under `/doc/examples`.\n\n## Some notes on installing\n\nNote: this package is not compatible with the original `plottr` tool.\nYou might want to install freshly if you still use the old version.\n\n## Requirements:\n* python \u003e= 3.8\n* the usual: numpy, mpl, ...\n* pandas \u003e= 0.22\n* xarray\n* pyqtgraph \u003e= 0.12.1\n\n# Recent changes:\n\nSee the [plottr GitHub Releases page](https://github.com/toolsforexperiments/plottr/releases) for versions and their changelogs\n\n## v0.10.0 2022-07-14\n\n### Added \n\n- added a generalized way for fitting data (or similar procedures that generate analysis parameters from datasets) (#293)\n- ... and more, see here https://github.com/toolsforexperiments/plottr/releases/tag/v0.10.0\n\n## v0.9.1 2022-01-12\n\n### Added\n\n- Fixed a crash bug with python 3.10 (#257)\n\n## v0.9.0 2021-12-20\n\n### Added\n\n* Add new analysis node for creating histogram of data by @wpfff in https://github.com/toolsforexperiments/plottr/pull/241\n\n### Fixed\n\n* bugfix: prevent flushing when we are updating data. by @wpfff in https://github.com/toolsforexperiments/plottr/pull/243\n* fix type checking with mypy 920 by @jenshnielsen in https://github.com/toolsforexperiments/plottr/pull/248\n* Bump minimum version of pyqtgraph by @jenshnielsen in https://github.com/toolsforexperiments/plottr/pull/247\n\n## v0.8.1 2021-11-30\n\n### Added\n\n- Test with python 3.10 and mark as supported (#238)\n\n### Fixed\n\n- add missing init file to config dir (#236)\n- Use a regular install in tests (#237)\n\n## v0.8.0 2021-11-11\n\n### Added\n\n- Inspectr: tag a run with a star (⭐) or cross (❌) icon, filter by those,\n  also show dataset metadata next to parameters and snapshot (#229)\n- Improvements to monitr: more stability in adding data to ddh5, better\n  performance by making data loading multithreaded and running reach plot\n  window in a separate process (#219)\n- Added pyqtgraph backend for plotting that can be used instead of matplotlib\n  (Example for how to select can be found in test/apps/autoplot_app.py) (#215, #218)\n\n### Fixed\n\n- Fix/invaliddata: small fixes when data contains a lot of invalid entries (#226)\n- Fix in shape recognition when adding data (#220)\n\n### Behind the scenes\n\n- Add minimal versions to dependencies (#201)\n- Make the .gitignore proper (#73)\n- add dependabot (#208)\n- Fix typechecking with mypy 0.9xx (#207)\n- clarify install instructions wrt qt and mention conda forge (#202)\n\n## 2021-06-08\n\n### Added\n\n- refactoring the plotting system (#166)\n- Add version log message to main ``__init__`` (#175)\n\n### Fixed\n\n- Fix crop if less than one row is not nan (#198)\n- Fix rgba error (#199)\n- Allow empty dataset if datadict is none (#195)\n\n### Behind the scenes\n\n- Modernize setup files (#194)\n- packaging cleanups (#177)\n- upgrade versioneer to 0.19 (#176)\n\n## 2021-02-16\n\n### Added\n\n- Add copy content features to inspectr and autoplot windows, specifically\n  - a new Copy pop up menu for copying content of cells in inspectr\n  - a new Copy metadata button in plot window for copying info about the dataset to clipboard\n\n### Fixed\n\n- remove redundant information between the optional \"info\" box on the plot and the plot title\n\n## 2021-02-08\n\n- Drop support for Python 3.6 and support type-checking with qcodes 0.21.0\n- Fix type-checking with numpy 1.20\n\n### Fixed\n- Fixed y-axis to not show axis-label if more than one plot is selected in 1D single-plot show.\n\n## 2020-08-21\n\n- Workaround for bug with pyqt installed via conda that would result in blank icons.\n- Add experimental support for using Pyside2 as an alternative to PyQt5\n\n## 2020-08-06\n\n### Added\n\n- Entry points for inspectr (plottr-inspectr) and autoplot (plottr-autoplot-ddh5) \n- LICENSE file has been added (no change to license of the code)\n- setup.py has been tweeked to ensure that sdist and bdist_wheel packages are generated correctly\n\n## 2020-06-05\n\n### Added\n\n- Usable version of hdf5 file support. can use the apps/monitr.py script to launch a tool that allows easy (live) plotting.\n\n## 2020-04-24\n\n### Fixed\n\n- there were several issues/annoyances that caused (minor) issues with grid handling and plotting in rare-ish circumstances. Most of them should be fixed now.\n\n### Added\n\n- A few docs and examples, mostly about grid usage.\n\n## 2020-04-17\n\n### Changed\n\n- the main repo has now moved to to a different organization: https://github.com/toolsforexperiments/plottr \n  the old repo (https://github.com/data-plottr/plottr) will be kept in sync for a while, but deleted eventually.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftoolsforexperiments%2Fplottr","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ftoolsforexperiments%2Fplottr","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftoolsforexperiments%2Fplottr/lists"}