{"id":40969652,"url":"https://github.com/tskit-dev/tutorials","last_synced_at":"2026-01-22T06:40:48.296Z","repository":{"id":37444799,"uuid":"121865639","full_name":"tskit-dev/tutorials","owner":"tskit-dev","description":"A set of tutorials for msprime and tskit.","archived":false,"fork":false,"pushed_at":"2025-12-29T14:20:19.000Z","size":31251,"stargazers_count":20,"open_issues_count":28,"forks_count":17,"subscribers_count":12,"default_branch":"main","last_synced_at":"2026-01-01T17:33:11.138Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"cc-by-4.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/tskit-dev.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2018-02-17T15:21:14.000Z","updated_at":"2025-12-29T14:15:40.000Z","dependencies_parsed_at":"2023-02-19T06:15:29.225Z","dependency_job_id":"eb8f48c2-7157-4ca4-8cd5-f050a2d26f37","html_url":"https://github.com/tskit-dev/tutorials","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/tskit-dev/tutorials","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tskit-dev%2Ftutorials","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tskit-dev%2Ftutorials/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tskit-dev%2Ftutorials/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tskit-dev%2Ftutorials/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/tskit-dev","download_url":"https://codeload.github.com/tskit-dev/tutorials/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tskit-dev%2Ftutorials/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":28657088,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-01-22T01:17:37.254Z","status":"online","status_checked_at":"2026-01-22T02:00:07.137Z","response_time":144,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2026-01-22T06:40:48.226Z","updated_at":"2026-01-22T06:40:48.279Z","avatar_url":"https://github.com/tskit-dev.png","language":"Jupyter Notebook","readme":"# tutorials\n\nA set of tutorials for the tskit ecosystem build using\n[Jupyter Book](https://jupyterbook.org/), served up at\n[https://tskit.dev/tutorials/](https://tskit.dev/tutorials/).\n\nMerges to this repo will trigger a rebuild of the\n[tskit.dev web site](https://tskit.dev/) via an\n[action](https://github.com/tskit-dev/tskit-site/actions) on the\n[tskit-site repository](https://github.com/tskit-dev/tskit-site/):\nlook there for any deployment issues.\n\n**Under construction**\n\nThese are quick notes for developers while the real developers page is\nunder construction.\n\n# Requirements\n\nInstall the Python requirements from `requirements.txt`:\n```\n$ python -m pip install -r requirements.txt\n```\n\nYou will also need a working R installation with `reticulate` and `irkernel` installed.\nThis command should do the trick:\n```\n$ R -e 'install.packages(c(\"reticulate\", \"IRkernel\")); IRkernel::installspec()'\n```\n\n# Building tutorials\n\n- To add a new tutorial, create a Markdown file and add its name to ``_toc.yml``.\n- If you are basing the tutorial on an existing notebook, use\n  [jupytext](https://github.com/mwouts/jupytext) to convert the notebook into\n  the right format.\n- To build locally, run ``make``. The output tells you where to find the\n  built `HTML` file(s).\n- Pages rendered at https://tskit.dev/tutorials.\n- Pages might take a while to be updated after a new tutorial is merged.\n\nIf you have an idea for a tutorial, please open an issue to discuss.\n","funding_links":[],"categories":[],"sub_categories":[],"project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftskit-dev%2Ftutorials","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ftskit-dev%2Ftutorials","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftskit-dev%2Ftutorials/lists"}