{"id":18392820,"url":"https://github.com/tsmbland/parameter-space-2d","last_synced_at":"2025-04-12T11:25:10.869Z","repository":{"id":156383083,"uuid":"592397402","full_name":"tsmbland/parameter-space-2d","owner":"tsmbland","description":"Tools for performing 2D parameter space analysis for deterministic models","archived":false,"fork":false,"pushed_at":"2023-08-09T14:19:09.000Z","size":1281,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-03-16T19:51:59.546Z","etag":null,"topics":["modeling","parallel-computing","python"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"cc-by-4.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/tsmbland.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2023-01-23T16:41:12.000Z","updated_at":"2023-08-09T14:18:17.000Z","dependencies_parsed_at":null,"dependency_job_id":"f392c631-8865-4aff-bd46-708693d12756","html_url":"https://github.com/tsmbland/parameter-space-2d","commit_stats":{"total_commits":32,"total_committers":3,"mean_commits":"10.666666666666666","dds":0.375,"last_synced_commit":"459d3da98064c1d115f3559c2729eb574c49d732"},"previous_names":[],"tags_count":1,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tsmbland%2Fparameter-space-2d","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tsmbland%2Fparameter-space-2d/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tsmbland%2Fparameter-space-2d/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tsmbland%2Fparameter-space-2d/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/tsmbland","download_url":"https://codeload.github.com/tsmbland/parameter-space-2d/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":248559110,"owners_count":21124415,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["modeling","parallel-computing","python"],"created_at":"2024-11-06T01:58:14.940Z","updated_at":"2025-04-12T11:25:10.833Z","avatar_url":"https://github.com/tsmbland.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# parameter-space-2d\n\n[![CC BY 4.0][cc-by-shield]][cc-by]\n[![Black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)\n[![pre-commit](https://img.shields.io/badge/pre--commit-enabled-brightgreen?logo=pre-commit\u0026logoColor=white)](https://github.com/pre-commit/pre-commit)\n[![PyPi version](https://badgen.net/pypi/v/parameter-space-2d/)](https://pypi.org/project/parameter-space-2d)\n\n\u003cp align=\"center\"\u003e\n    \u003cimg src=\"https://raw.githubusercontent.com/tsmbland/parameter-space-2d/master/docs/example_maps.png\" width=\"100%\" height=\"100%\"/\u003e\n\u003c/p\u003e\n\nTools for performing 2D parameter space analysis for deterministic models\n\n## Method\n\nParameter space maps are built up by performing an iterative grid search, preferentially exploring parameter regimes \nclose to detected boundaries. Various checks are in place to ensure that any detected boundaries are fully explored.\n\n\n\u003cp align=\"center\"\u003e\n    \u003cimg src=\"https://raw.githubusercontent.com/tsmbland/parameter-space-2d/master/docs/method.png\" width=\"100%\" height=\"100%\"/\u003e\n\u003c/p\u003e\n\n_Example of a model with two states (blue and orange) and variable input parameters β and ε_\n\n\n## Installation\n\n    pip install parameter-space-2d\n\n## Instructions\n\nThe repository contains a couple of notebooks with instructions for performing analysis, using the Goehring et al. (2011) PAR polarity model as an example. To run the notebooks interactively, click here:\n\n\u003ca target=\"_blank\" href=\"https://colab.research.google.com/github/tsmbland/parameter-space-2d/blob/master/scripts/INDEX.ipynb\"\u003e\n  \u003cimg src=\"https://colab.research.google.com/assets/colab-badge.svg\" alt=\"Open In Colab\" height=20/\u003e\u003c/a\u003e\n\n\n\n## License\n\nThis work is licensed under a\n[Creative Commons Attribution 4.0 International License][cc-by].\n\n[![CC BY 4.0][cc-by-image]][cc-by]\n\n[cc-by]: http://creativecommons.org/licenses/by/4.0/\n\n[cc-by-image]: https://i.creativecommons.org/l/by/4.0/88x31.png\n\n[cc-by-shield]: https://img.shields.io/badge/License-CC%20BY%204.0-lightgrey.svg\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftsmbland%2Fparameter-space-2d","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ftsmbland%2Fparameter-space-2d","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftsmbland%2Fparameter-space-2d/lists"}