{"id":15998981,"url":"https://github.com/tyn1998/ppi-galaxy","last_synced_at":"2026-05-05T07:31:35.375Z","repository":{"id":109659188,"uuid":"366952997","full_name":"tyn1998/ppi-galaxy","owner":"tyn1998","description":"(life_tree --\u003e ppi_resilience) --\u003e ppi-data-provider --\u003e ppi-galaxy*","archived":false,"fork":false,"pushed_at":"2021-05-31T12:42:10.000Z","size":15315,"stargazers_count":0,"open_issues_count":1,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-04-05T01:14:20.906Z","etag":null,"topics":["graph","ngraph","react","visualizations"],"latest_commit_sha":null,"homepage":"","language":"JavaScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/tyn1998.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2021-05-13T06:15:23.000Z","updated_at":"2021-05-31T12:42:13.000Z","dependencies_parsed_at":"2023-04-08T05:32:48.427Z","dependency_job_id":null,"html_url":"https://github.com/tyn1998/ppi-galaxy","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/tyn1998/ppi-galaxy","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tyn1998%2Fppi-galaxy","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tyn1998%2Fppi-galaxy/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tyn1998%2Fppi-galaxy/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tyn1998%2Fppi-galaxy/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/tyn1998","download_url":"https://codeload.github.com/tyn1998/ppi-galaxy/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tyn1998%2Fppi-galaxy/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":32640533,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-05-04T10:08:07.713Z","status":"online","status_checked_at":"2026-05-05T02:00:06.033Z","response_time":54,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["graph","ngraph","react","visualizations"],"created_at":"2024-10-08T08:23:16.410Z","updated_at":"2026-05-05T07:31:35.356Z","avatar_url":"https://github.com/tyn1998.png","language":"JavaScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"# PPI Galaxy\n\nVisualization of protein-protein interactions of 1840 species.\n\nThis visualization project is a part of [my-graduation-project](https://github.com/tyn1998/my-graduation-project), and it is totally inspired by and based on [pm](https://github.com/anvaka/pm) and [ngraph](https://github.com/anvaka/ngraph), the amazing works of [anvaka](https://github.com/anvaka/). Thank you, anvaka!\n\n# Screenshots\n\n- Welcome Page\n\n![welcomePage](./screenshots/welcomePage.png)\n\n- Galaxy Page\n\n![galaxyPage](./screenshots/galaxyPage.png)\n\n- Compare Page\n\n![comparePage](./screenshots/comparePage.png)\n\n# Feature\n\n- Interactive\n  - welcome page\n    - scroll down and there is a mini [tree of life](https://en.wikipedia.org/wiki/Tree_of_life), double click \n      the end node of a certain branch to visit corresponding galaxy page\n  - galaxy page\n    - use keyboard and mouse to explore the galaxy\n    - search nodes by name and click to locate\n    - click a node and all linked nodes are shown in a list\n  - compare page\n    - double click node in scatter chart to visit corresponding galaxy page\n- Rich statistics\n  - species information (left-top corner box)\n  - node information (right-bottom box)\n# Behind the scene\n\nanvaka provided an elegant way to make presenting large graph smoothly in web browser happen. The secret is to separate layout-computing part (i.e. computing each point's (x, y, z) position in browser ) from the whole presenting process. The browser just renders the graph with its layout file that has already been generated.\n\nIf you want to use your own graph, just see [your-own-graph](https://github.com/anvaka/pm#your-own-graphs).\n\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftyn1998%2Fppi-galaxy","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ftyn1998%2Fppi-galaxy","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ftyn1998%2Fppi-galaxy/lists"}