{"id":30019621,"url":"https://github.com/veupathdb/service-multi-blast","last_synced_at":"2025-08-06T01:20:11.364Z","repository":{"id":42186912,"uuid":"303794401","full_name":"VEuPathDB/service-multi-blast","owner":"VEuPathDB","description":"Async BLAST+ query service and supporting libraries.","archived":false,"fork":false,"pushed_at":"2025-07-29T20:07:16.000Z","size":9690,"stargazers_count":0,"open_issues_count":22,"forks_count":0,"subscribers_count":23,"default_branch":"dev","last_synced_at":"2025-07-29T22:54:52.251Z","etag":null,"topics":["blast","fasta","library","ncbi","ncbi-blast","query","service"],"latest_commit_sha":null,"homepage":"","language":"Kotlin","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/VEuPathDB.png","metadata":{"files":{"readme":"readme.adoc","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2020-10-13T18:27:01.000Z","updated_at":"2024-10-30T15:35:47.000Z","dependencies_parsed_at":"2025-07-29T22:09:48.618Z","dependency_job_id":"070c21b8-418c-4664-b2f8-685013b04adf","html_url":"https://github.com/VEuPathDB/service-multi-blast","commit_stats":null,"previous_names":[],"tags_count":77,"template":false,"template_full_name":"VEuPathDB/example-jaxrs-container-service","purl":"pkg:github/VEuPathDB/service-multi-blast","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VEuPathDB%2Fservice-multi-blast","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VEuPathDB%2Fservice-multi-blast/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VEuPathDB%2Fservice-multi-blast/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VEuPathDB%2Fservice-multi-blast/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/VEuPathDB","download_url":"https://codeload.github.com/VEuPathDB/service-multi-blast/tar.gz/refs/heads/dev","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VEuPathDB%2Fservice-multi-blast/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":269004948,"owners_count":24343366,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-05T02:00:12.334Z","response_time":2576,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["blast","fasta","library","ncbi","ncbi-blast","query","service"],"created_at":"2025-08-06T01:20:05.950Z","updated_at":"2025-08-06T01:20:11.352Z","avatar_url":"https://github.com/VEuPathDB.png","language":"Kotlin","funding_links":[],"categories":[],"sub_categories":[],"readme":"= MultiBlast\n:source-highlighter: highlightjs\n:icons: font\n\nimage:https://img.shields.io/github/license/veupathdb/service-multi-blast[License]\n\nThis repository is a \"monorepo\" containing various projects relating to and\nsupporting the VEuPathDB MultiBlast service stack.\n\nFor development details and information see the\nlink:docs/development.adoc[Developer Info] doc and/or the\nlink:docs/design/2.0/design.adoc[Design doc]\n\nAn index of available API documentation can be found at\nhttps://veupathdb.github.io/service-multi-blast/\n\n== Projects / Components\n\n=== Services / Images\n\nlink:service-query/[BLAST+ Query Service]::\nA containerized service whose purpose is the asynchronous execution of BLAST\nqueries against mounted databases.\n\nlink:service-report/[BLAST+ Result Formatting Service]::\nA containerized services whose purpose is the asynchronous formatting of ASN.1\nBLAST query results into various other formats via the BLAST+ `blast_formatter`\ntool.\n\nlink:docker-queue-db/[MultiBlast Queue Database]::\nDocker image containing setup scripts to provision the database schemata\nnecessary to support the MultiBlast query and report services.\n\n\n=== Libraries\n\nlink:lib-blast-query-parser/[BLAST+ Query Parsing Tools]::\nMulti-sequence BLAST query parsing tool kit.\n\nlink:lib-blast-types/[BLAST+ CLI API Wrapper Type Library]::\nNCBI BLAST+ tool CLI API wrapper.\n+\nAllows easy programmatic construction and validation of CLI calls to BLAST+\ntools.\n\nlink:lib-jvm-mblast-sdk[MultiBlast API SDK]::\nJVM SDK for working with the MultiBlast API.\n\nlink:lib-mblast-utils/[MultiBlast Common Utilities]::\nVarious utilities common to the other  services and libraries in this repo.\n\nlink:lib-temp-cache/[Temp File Management Utilities]::\nExpiring temporary file factory.\n\nlink:lib-mblast-gradle/[MultiBlast Gradle Plugin]::\nA Gradle extension that adds utilities to support the MultiBlast project build\ntasks.\n\n=== Deployment\n\nlink:stack-mblast[MultiBlast Docker Compose Stack]::\nDocker Compose stack configuration for MultiBlast.\n\nlink:ddl-oracle/[User Database DDL]::\nDDL for the database schema and tables backing MultiBlast in the VEuPathDB user\ndatabase.\n\nlink:script-mblast2-migration/[v2.0 Migration Script]::\nScript to migrate the backing user database from `v0.x` and `v1.x` data to\n`v2.x`.\n\n=== Test / Support\n\nlink:script-mblast-e2e/[End-to-End Tests]::\nTest script that performs end-to-end testing on a running MultiBlast instance.","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fveupathdb%2Fservice-multi-blast","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fveupathdb%2Fservice-multi-blast","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fveupathdb%2Fservice-multi-blast/lists"}