{"id":23535215,"url":"https://github.com/warelab/maizecode","last_synced_at":"2026-01-23T20:41:51.318Z","repository":{"id":71605858,"uuid":"104387208","full_name":"warelab/maizecode","owner":"warelab","description":"Homepage for the MaizeCode project on leveraging the CyVerse 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workflow](wrappers/rna-seq_workflow/README.md)\n  * [SciApps platform guide](https://cyverse-sciapps-guide.readthedocs-hosted.com/en/latest/index.html)\n  * [Optimizing modular Agave apps for SciApps](docs/Agave-SciApps.md)\n  * [Listing of Singularity images installed on SciApps](docs/Singularity-SciApps.md)\n    * [DE Tool development using Bioconda and Biocontainers](https://pods.iplantcollaborative.org/wiki/display/TUT/Biocontainers+for+the+Discovery+Environment) ([internal link](https://wiki.cyverse.org/wiki/display/csmgmt/DE+Tool+Docker+Image+registration+and+installation+using+Bioconda+and+Biocontainers))\n    * [BioConda recipes](https://github.com/bioconda/bioconda-recipes)\n    * [Docker 2 Singularity](https://github.com/singularityware/docker2singularity)\n* Data Release\n  * [MaizeCode.org](http://www.maizecode.org/data/)\n  * [CyVerse Data Commons](http://datacommons.cyverse.org/)\n  * NCBI Sequence Read Archive (SRA) Submission Tutorial\n    * [CyVerse Wiki tutorial](https://wiki.cyverse.org/wiki/pages/viewpage.action?pageId=20351132)\n    * [CyVerse Learning Center tutorial](https://learning.cyverse.org/projects/sra_submission_quickstart/en/latest/)\n    * [NCBI submission portal](https://www.ncbi.nlm.nih.gov/sra/docs/submitportal/)\n  * NCBI Whole Genome Shotgun (WGS) Submission Tutorial\n    * [CyVerse Wiki tutorial](https://wiki.cyverse.org/wiki/pages/viewpage.action?pageId=34834057)\n    * [NCBI genome submission](https://www.ncbi.nlm.nih.gov/genbank/genomesubmit/)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fwarelab%2Fmaizecode","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fwarelab%2Fmaizecode","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fwarelab%2Fmaizecode/lists"}