{"id":16739374,"url":"https://github.com/zafarali/tumorheterogeneity","last_synced_at":"2025-07-10T06:06:13.293Z","repository":{"id":78568220,"uuid":"59908734","full_name":"zafarali/tumorheterogeneity","owner":"zafarali","description":"A more powerful analysis of tumor heterogeneity","archived":false,"fork":false,"pushed_at":"2018-04-01T02:51:09.000Z","size":5120,"stargazers_count":0,"open_issues_count":0,"forks_count":1,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-03-15T22:43:44.411Z","etag":null,"topics":["cancer-genomics","cancer-research","computational-biology","oncology"],"latest_commit_sha":null,"homepage":"","language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/zafarali.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2016-05-28T18:22:31.000Z","updated_at":"2018-04-01T02:51:10.000Z","dependencies_parsed_at":"2023-03-12T04:38:54.824Z","dependency_job_id":null,"html_url":"https://github.com/zafarali/tumorheterogeneity","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/zafarali/tumorheterogeneity","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/zafarali%2Ftumorheterogeneity","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/zafarali%2Ftumorheterogeneity/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/zafarali%2Ftumorheterogeneity/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/zafarali%2Ftumorheterogeneity/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/zafarali","download_url":"https://codeload.github.com/zafarali/tumorheterogeneity/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/zafarali%2Ftumorheterogeneity/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":264537298,"owners_count":23624418,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["cancer-genomics","cancer-research","computational-biology","oncology"],"created_at":"2024-10-13T00:50:37.830Z","updated_at":"2025-07-10T06:06:13.254Z","avatar_url":"https://github.com/zafarali.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Investigation of Tumor Heterogeneity\n\nThis repository contains code for the paper:\n\n_Ahmed, Zafarali, and  Gravel, Simon._ Genetic Diversity in Circulating Tumor Cell Clusters. _Manuscript in preparation_ (2017).\n\nWe use [TumorSimulator](http://www2.ph.ed.ac.uk/~bwaclaw/cancer-code/) with some modifications found under `./model`. The HCC experimental data was obtained from [Ling et al. 2015](http://www.pnas.org/content/112/47/E6496.short) found in `./clinical_data`.\n\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fzafarali%2Ftumorheterogeneity","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fzafarali%2Ftumorheterogeneity","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fzafarali%2Ftumorheterogeneity/lists"}