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Awesome-Medical-Large-Language-Models

Curated papers on Large Language Models in Healthcare and Medical domain
https://github.com/burglarhobbit/Awesome-Medical-Large-Language-Models

Last synced: 6 days ago
JSON representation

  • Survey Papers + Clinical Studies <a name="survey-studies"></a>

  • Articles <a name="articles"></a>

  • Large Language Models <a name="llms"></a>

    • Med_Gemini-[2D,3D,Polygenic - 05 | [Blog](https://research.google/blog/advancing-medical-ai-with-med-gemini/)
    • KeBioLM - 04 | [Github](https://github.com/GanjinZero/KeBioLM) <br> ![Star](https://img.shields.io/github/stars/GanjinZero/KeBioLM?style=social&label=Stars)
    • Clinical Camel - Source Expert-Level Medical Language Model with Dialogue-Based Knowledge Encoding | Vector Institute, <br> University of Toronto <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:258832351?fields=citationCount&query=%24.citationCount&label=citations) | 2023-05 | [Hugging🤗](https://huggingface.co/wanglab/ClinicalCamel-70B) <br> [Github](https://github.com/bowang-lab/clinical-camel) ![Star](https://img.shields.io/github/stars/bowang-lab/clinical-camel?style=social&label=Stars)
    • MEDALPACA - AN OPEN-SOURCE COLLECTION OF MEDICAL CONVERSATIONAL AI MODELS AND TRAINING DATA | University Hospital Aachen <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:258180068?fields=citationCount&query=%24.citationCount&label=citations) | 2023-04 | [Hugging🤗](https://huggingface.co/medalpaca/medalpaca-7b) <br> [Github](https://github.com/kbressem/medAlpaca) ![Star](https://img.shields.io/github/stars/kbressem/medAlpaca?style=social&label=Stars)
    • PMC-LLaMA - source Language Models for Medicine | CMIC, Shanghai Jiao Tong University <br> Shanghai AI Laboratory ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:263888272?fields=citationCount&query=%24.citationCount&label=citations) | 2023-04 | [Hugging🤗](https://huggingface.co/chaoyi-wu/PMC_LLAMA_7B) <br> [Github](https://github.com/chaoyi-wu/PMC-LLaMA) ![Star](https://img.shields.io/github/stars/chaoyi-wu/PMC-LLaMA?style=social&label=Stars)
    • ChatDoctor - Tuned on a Large Language Model Meta-AI (LLaMA) Using Medical Domain Knowledge | University of Texas <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:257756992?fields=citationCount&query=%24.citationCount&label=citations) | 2023-03 | [Github](https://github.com/Kent0n-Li/ChatDoctor) ![Star](https://img.shields.io/github/stars/Kent0n-Li/ChatDoctor?style=social&label=Stars)
    • BioMedLM-PubMedGPT - built AI model trained to interpret biomedical language | Stanford CRFM, MosaicML | 2022-12 | [HuggingFace](https://huggingface.co/stanford-crfm/BioMedLM) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/stanford-crfm/BioMedLM&query=%24.likes&label=🤗+Likes)
    • Med-PaLM - 12 | [Github](https://github.com/conceptofmind/PaLM) <br> ![Star](https://img.shields.io/github/stars/conceptofmind/PaLM?style=social&label=Stars)
    • ClinicalT5 - 12 | [HuggingFace](https://huggingface.co/luqh/ClinicalT5-large) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/luqh/ClinicalT5-large&query=%24.likes&label=🤗+Likes)
    • GatorTron - 12 | [HuggingFace](https://huggingface.co/UFNLP/gatortron-base) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/UFNLP/gatortron-base&query=%24.likes&label=🤗+Likes)
    • BioBART - 04 | [HuggingFace](https://huggingface.co/GanjinZero/biobart-v2-base) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/GanjinZero/biobart-v2-base&query=%24.likes&label=🤗+Likes)
    • MedVersa - 05 | -
    • OpenBioLLM-70B - source Large Language Models in Medical Domain | Saama AI Labs | 2024-04 | [HuggingFace](https://huggingface.co/aaditya/Llama3-OpenBioLLM-70B) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/aaditya/Llama3-OpenBioLLM-70B&query=%24.likes&label=🤗+Likes)
    • Internist.ai - quality, mixed-domain data on the performance of medical language models | Université catholique de Louvain, Cliniques Universitaires Saint-Luc <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:269985798?fields=citationCount&query=%24.citationCount&label=citations) | 2024-05 | [HuggingFace](https://huggingface.co/internistai/base-7b-v0.2) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/internistai/base-7b-v0.2&query=%24.likes&label=🤗+Likes)
    • Med-Gemini - 04 | -
    • Llama-3[8B - of-the-Art Large Language Model for Medicine in 24 Hours | LiGHT, Yale-EPFL <br> ![citations](https://img.shields.io/badge/citations-N.A.-red) | 2024-04 | [Blog](https://meditron-ddx.github.io/llama3-meditron.github.io)
    • Hippocrates - Source Framework for Advancing Large Language Models in Healthcare | KUIS AI Center <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:269362560?fields=citationCount&query=%24.citationCount&label=citations) | 2024-04 | [HuggingFace](https://huggingface.co/emrecanacikgoz/hippomistral) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/emrecanacikgoz/hippomistral&query=%24.likes&label=🤗+Likes)
    • BioMistral - Source Pretrained Large Language Models for Medical Domains | LIA - Avignon Université, <br> Nantes Université ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:267740180?fields=citationCount&query=%24.citationCount&label=citations) | 2024-02 | [HuggingFace](https://huggingface.co/BioMistral/BioMistral-7B) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/BioMistral/BioMistral-7B&query=%24.likes&label=🤗+Likes)
    • AMIE - 01 | -
    • MEDITRON-70B - 11 | [Hugging🤗](https://huggingface.co/epfl-llm/meditron-70b) <br> [Github](https://github.com/epfLLM/meditron) ![Star](https://img.shields.io/github/stars/epfLLM/meditron?style=social&label=Stars)
    • Asclepius - 09 | [Hugging🤗](https://huggingface.co/starmpcc/Asclepius-Llama2-7B) <br> [Github](https://github.com/starmpcc/Asclepius) ![Star](https://img.shields.io/github/stars/starmpcc/Asclepius?style=social&label=Stars)
    • Radiology-Llama2 - in-Class Large Language Model for Radiology | University of Georgia <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:261696494?fields=citationCount&query=%24.citationCount&label=citations) | 2023-08 | -
    • CoDoC - enabled diagnosis via complementarity-driven deferral to clinicians | DeepMind, Google <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:259939727?fields=citationCount&query=%24.citationCount&label=citations) | 2023-07 | [Github](https://github.com/deepmind/codoc/tree/main) <br> ![Star](https://img.shields.io/github/stars/deepmind/codoc?style=social&label=Stars)
    • Med-PaLM 2 - Level Medical Question Answering with Large Language Models | Google <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:258715226?fields=citationCount&query=%24.citationCount&label=citations) | 2023-05 | -
    • Pretrained Language Models for Biomedical and Clinical Tasks: Understanding and Extending the State-of-the-Art - 11 | [Github](https://github.com/facebookresearch/bio-lm) <br> ![Star](https://img.shields.io/github/stars/facebookresearch/bio-lm?style=social&label=Stars)
    • BioMegatron - 10 | [HuggingFace](https://huggingface.co/EMBO/BioMegatron345mUncased) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/EMBO/BioMegatron345mUncased&query=%24.likes&label=🤗+Likes)
    • PubMedBERT - Specific Language Model Pretraining for Biomedical Natural Language Processing | Microsoft Research <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:220919723?fields=citationCount&query=%24.citationCount&label=citations) | 2020-07 | [HuggingFace](https://huggingface.co/microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext&query=%24.likes&label=🤗+Likes)
    • Publicly Available Clinical BERT Embeddings - 04 | [HuggingFace](https://huggingface.co/emilyalsentzer/Bio_ClinicalBERT) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/emilyalsentzer/Bio_ClinicalBERT&query=%24.likes&label=🤗+Likes)
    • ClinicalBERT - 04 | [Github](https://github.com/kexinhuang12345/clinicalBERT) <br> ![Star](https://img.shields.io/github/stars/kexinhuang12345/clinicalBERT?style=social&label=Stars)
    • BioBERT - trained biomedical language representation model for biomedical text mining | Korea University <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:59291975?fields=citationCount&query=%24.citationCount&label=citations) | 2019&#x2011;01 | [Github](https://github.com/dmis-lab/biobert) <br> ![Star](https://img.shields.io/github/stars/dmis-lab/biobert?style=social&label=Stars)
    • MEDITRON-70B - 11 | [Hugging🤗](https://huggingface.co/epfl-llm/meditron-70b) <br> [Github](https://github.com/epfLLM/meditron) ![Star](https://img.shields.io/github/stars/epfLLM/meditron?style=social&label=Stars)
    • Radiology-Llama2 - in-Class Large Language Model for Radiology | University of Georgia <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:261696494?fields=citationCount&query=%24.citationCount&label=citations) | 2023-08 | -
    • CoDoC - enabled diagnosis via complementarity-driven deferral to clinicians | DeepMind, Google <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:259939727?fields=citationCount&query=%24.citationCount&label=citations) | 2023-07 | [Github](https://github.com/deepmind/codoc/tree/main) <br> ![Star](https://img.shields.io/github/stars/deepmind/codoc?style=social&label=Stars)
    • Clinical Camel - Source Expert-Level Medical Language Model with Dialogue-Based Knowledge Encoding | Vector Institute, <br> University of Toronto <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:258832351?fields=citationCount&query=%24.citationCount&label=citations) | 2023-05 | [Hugging🤗](https://huggingface.co/wanglab/ClinicalCamel-70B) <br> [Github](https://github.com/bowang-lab/clinical-camel) ![Star](https://img.shields.io/github/stars/bowang-lab/clinical-camel?style=social&label=Stars)
    • GatorTron - 12 | [HuggingFace](https://huggingface.co/UFNLP/gatortron-base) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/UFNLP/gatortron-base&query=%24.likes&label=🤗+Likes)
  • Large Vision Models <a name="lvms"></a>

    • LLaVA-Med - and-Vision Assistant for Biomedicine in One Day | Microsoft Research <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:258999820?fields=citationCount&query=%24.citationCount&label=citations) | 2023-06 | [Hugging🤗](https://huggingface.co/microsoft/llava-med-7b-delta) <br> [Github](https://github.com/microsoft/LLaVA-Med) ![Star](https://img.shields.io/github/stars/microsoft/LLaVA-Med?style=social&label=Stars)
    • Segment anything model for medical image analysis: An experimental study - 04 | [Github](https://github.com/mazurowski-lab/segment-anything-medical-evaluation) <br> ![Star](https://img.shields.io/github/stars/mazurowski-lab/segment-anything-medical-evaluation?style=social&label=Stars)
    • BiomedCLIP - text pairs | Microsoft Research <br> ![citations](https://img.shields.io/badge/dynamic/json?url=https://api.semanticscholar.org/graph/v1/paper/CorpusID:257280046?fields=citationCount&query=%24.citationCount&label=citations) | 2023-03 | [HuggingFace](https://huggingface.co/microsoft/BiomedCLIP-PubMedBERT_256-vit_base_patch16_224) <br> ![Likes](https://img.shields.io/badge/dynamic/json?url=https://huggingface.co/api/models/microsoft/BiomedCLIP-PubMedBERT_256-vit_base_patch16_224&query=%24.likes&label=🤗+Likes)