Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
awesome-chemistry-info
https://github.com/chemistrydatachampions/awesome-chemistry-info
Last synced: 4 days ago
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Training resources
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Plotting with R and Rstudio
- The Turing Way - a "lightly opinionated guide to reproducible data science" that can be adapted for our own use. Powerpoint slides about this resource are on [Zenodo.](http://doi.org/10.5281/zenodo.3292461)
- Periodic Table of the Open Research Ecosystem - this can be downloaded and adapted based on your own perspective and position in this ecosystem.
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Getting-Started
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Getting your data out of Excel
- Excel vs R: when to use what - because Excel is a great tool, but another might be better.
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Plotting with R and Rstudio
- Plotting some data in R - make a plot!
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Formats and standards
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Plotting with R and Rstudio
- FAIR chemistry data - Chemistry Go Fair Manifesto. [Top 10 FAIR Data & Software Things](https://librarycarpentry.org/Top-10-FAIR/)
- Nature paper. - NEST repository](https://www.plumed-nest.org/).
- Open Babel - a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas.
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Software
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Plotting with R and Rstudio
- ChemDataExtractor - automatically extract chemical information from scientific documents.
- RStudio - original and best.
- RStudio - original and best.
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ELN
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Plotting with R and Rstudio
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Experiments
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Plotting with R and Rstudio
- IYCN (International Young Chemists' Network) Experiment Database - Experiments are freely available to download in different languages in a PDF file.
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OA publishing
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Plotting with R and Rstudio
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Data management plans
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Plotting with R and Rstudio
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