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Awesome-Language-Model-on-Graphs

A curated list of papers and resources based on "Large Language Models on Graphs: A Comprehensive Survey" (TKDE)
https://github.com/PeterGriffinJin/Awesome-Language-Model-on-Graphs

Last synced: 4 days ago
JSON representation

  • Perspectives

  • Text-Attributed Graphs

    • <img src="./fig/star.svg" width="15" height="15" /> LLM as Predictor (Node)

      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - stanford/GreaseLM)], 2022.1, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - submit), 2023.10, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue)![](https://img.shields.io/badge/EncoderDecoder-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue)![](https://img.shields.io/badge/EncoderDecoder-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue)![](https://img.shields.io/badge/EncoderDecoder-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - Lab/LLM-Structured-Data)], 2023.9, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue)![](https://img.shields.io/badge/EncoderDecoder-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - submit), 2023.10, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - stanford/GreaseLM)], 2022.1, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - BERT)], 2022.9, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - BERT)], 2022.9, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
    • <img src="./fig/star.svg" width="15" height="15" /> LLM as Aligner (Node)

      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - Rita/THLM)], 2023.10, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - Rita/THLM)], 2023.10, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - Rita/THLM)], 2023.10, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
    • <img src="./fig/star.svg" width="15" height="15" /> Datasets

      • [PDF - Li/TEG-Benchmark/tree/main)] [[Dataset](https://huggingface.co/datasets/ZhuofengLi/TEG-Datasets/tree/main)], 2024.9,
      • [PDF - Li/TEG-Benchmark/tree/main)] [[Dataset](https://huggingface.co/datasets/ZhuofengLi/TEG-Datasets/tree/main)], 2024.9,
    • <img src="./fig/star.svg" width="15" height="15" /> LLM as Encoder

      • [PDF - LM)], 2021.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - xrt)], 2021.11, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - LM)], 2021.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue)![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Medium-red) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - Benchmark)], 2023.11, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/EncoderOnly-blue)
      • [PDF - xrt)], 2021.11, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF
      • [PDF
      • [PDF
      • [PDF
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue)![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)![](https://img.shields.io/badge/LLM-red)
      • [PDF - LLM)], 2023.7, ![](https://img.shields.io/badge/EncoderOnly-blue)![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Medium-red) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue)![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)![](https://img.shields.io/badge/LLM-red)
      • [PDF - Benchmark)], 2023.11, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue)![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/EncoderOnly-blue)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - NLP/GraphLanguageModels), 2024.1, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/EncoderDecoder-blue) ![](https://img.shields.io/badge/LLM_T5-red)
      • [PDF - NLP/GraphLanguageModels), 2024.1, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/EncoderDecoder-blue) ![](https://img.shields.io/badge/LLM_T5-red)
      • [PDF
      • [PDF
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
  • Pure Graphs

    • <img src="./fig/star.svg" width="15" height="15" /> Direct Answering

      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - llm)], 2023.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - Heng/NLGraph)], 2023.5, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
    • <img src="./fig/star.svg" width="15" height="15" /> Heuristic Reasoning

      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - LLM-MDQA)], 2023.8, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - LLM-MDQA)], 2023.8, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - on-graphs)], 2023.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - GAMMA/ProGraph)] [[Models and Datasets](https://huggingface.co/lixin4sky/ProGraph)], 2024.9, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - GAMMA/ProGraph)] [[Models and Datasets](https://huggingface.co/lixin4sky/ProGraph)], 2024.9, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
    • <img src="./fig/star.svg" width="15" height="15" /> Algorithmic Reasoning

      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - CoT)] [[Data](https://huggingface.co/datasets/PeterJinGo/GRBench)], 2024.4, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - CoT)] [[Data](https://huggingface.co/datasets/PeterJinGo/GRBench)], 2024.4, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
  • Text-Paired Graphs (Molecules)

    • <img src="./fig/star.svg" width="15" height="15" /> Datasets

    • <img src="./fig/star.svg" width="15" height="15" /> LLM as Predictor (Graph)

      • [PDF - smile/SMILES-BERT)], 2019.09, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - PLM)], 2022.02, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - ht/GIMLET)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - smile/SMILES-BERT)], 2019.09, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - nlp/MolT5)], 2022.12, ![](https://img.shields.io/badge/EncoderDecoder-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - nlp/MolT5)], 2022.12, ![](https://img.shields.io/badge/EncoderDecoder-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - ht/GIMLET)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - cn/relm)], 2023.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - cn/relm)], 2023.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - plus-molecules)], 2024.2, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - plus-molecules)], 2024.2, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - PLM)], 2022.02, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - PLM)], 2022.02, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - PLM)], 2022.02, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - PLM)], 2022.02, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - nlp/MolT5)], 2022.12, ![](https://img.shields.io/badge/EncoderDecoder-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - PLM)], 2022.02, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - PLM)], 2022.02, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - PLM)], 2022.02, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - PLM)], 2022.02, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - transformer)], 2023.6, ![](https://img.shields.io/badge/DecoderOnly-blue), ![](https://img.shields.io/badge/Medium-red)
    • <img src="./fig/star.svg" width="15" height="15" /> LLM as Aligner (Graph)

      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - jku/clamp)], 2023.5, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - jku/clamp)], 2023.5, ![](https://img.shields.io/badge/EncoderOnly-blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red)
  • Others

    • <img src="./fig/star.svg" width="15" height="15" /> LLM as Aligner (Graph)

      • [PDF
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - GAMMA/GraphTeam)], 2024.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Large-red) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - GCoder/tree/master)], 2024.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Large-red) ![](https://img.shields.io/badge/LLM-red)
      • [PDF
      • [PDF - blue) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - blue) ![](https://img.shields.io/badge/Medium-red) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - GAMMA/GraphTeam)], 2024.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Large-red) ![](https://img.shields.io/badge/LLM-red)
      • [PDF - GCoder/tree/master)], 2024.10, ![](https://img.shields.io/badge/DecoderOnly-blue) ![](https://img.shields.io/badge/Large-red) ![](https://img.shields.io/badge/LLM-red)