https://github.com/dfajar2/bigSCale

An Analytical Framework for Big-Scale Single Cell Data
https://github.com/dfajar2/bigSCale

Last synced: 24 days ago
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An Analytical Framework for Big-Scale Single Cell Data

• Host: GitHub
• URL: https://github.com/dfajar2/bigSCale
• Owner: dfajar2
• Created: 2018-06-12T19:54:22.000Z (about 6 years ago)
• Default Branch: master
• Last Pushed: 2018-06-12T19:54:45.000Z (about 6 years ago)
• Last Synced: 2023-10-26T09:47:47.341Z (8 months ago)
• Size: 20.5 MB
• Stars: 1
• Watchers: 2
• Forks: 6
• Open Issues: 0
• Metadata Files:
  • Readme: readme.txt

Lists

• awesome_single_cell - bigSCale - [matlab] - An analytical framework for big-scale single cell data. (Software packages / RNA-seq)
• awesome-single-cell - bigSCale - [matlab] - An analytical framework for big-scale single cell data. (Software packages / RNA-seq)
• awesome-single-cell - bigSCale - [matlab] - An analytical framework for big-scale single cell data. (Software packages / RNA-seq)

README

        
bigSCAle tool

Please have a lool to the youtube bigSCale tutorial 

https://youtu.be/8hTHodjemIg

Giovanni Iacono

9 october 2017

UPDATES

21/02/2018

V1.2

Better calculation of modules of coexpressed genes.

Added a new output giving Zscores/pvalues for all genes and all clusters.

01/02/2018

V1.1 

Introduced a module for the removal of confounding signatures.

Improved the DE analysis by integrating the native bigSCale test with Wilcoxon test.

For help with bigSCale: https://groups.google.com/forum/#!forum/bigscale-help-and-support

For information contact [email protected]

Follow on twitter the updates: @gio_iacono_work and @hoheyn