https://github.com/pimentel/scca-bc

Sparse Canonical Correlation Analysis Biclustering
https://github.com/pimentel/scca-bc

Last synced: 28 days ago
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Sparse Canonical Correlation Analysis Biclustering

• Host: GitHub
• URL: https://github.com/pimentel/scca-bc
• Owner: pimentel
• License: mit
• Created: 2014-10-15T02:57:06.000Z (over 9 years ago)
• Default Branch: master
• Last Pushed: 2015-03-16T05:29:44.000Z (over 9 years ago)
• Last Synced: 2024-02-25T04:33:48.752Z (4 months ago)
• Language: R
• Homepage:
• Size: 395 KB
• Stars: 1
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Lists

• awesome-multi-omics - SCCA-BC - Pimentel - Biclustering by sparse canonical correlation analysis - [paper](https://doi.org/10.1007/s40484-017-0127-0) (Software packages and methods / Multi-omics correlation or factor analysis)

README

        
# SCCAB(iclustering)

This method finds linear biclusters by exploiting SCCA.

# TODOs

## Features

- Fused Lasso on **D**

- Complete set of plotting functions

## Major refactoring

- Start using `fscca` instead of `scca`

- Formal class instead of just passing

- Post processes more formal

- ~~Move to `roxygen`~~

- ~~Turn into a real R package~~

## Minor

- camelCase to snake_case

- remove '.' in functions