https://github.com/yuanruya/CellEnBoost

https://github.com/yuanruya/CellEnBoost

Last synced: 4 months ago
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• Host: GitHub
• URL: https://github.com/yuanruya/CellEnBoost
• Owner: yuanruya
• Created: 2023-04-27T13:28:10.000Z (about 1 year ago)
• Default Branch: main
• Last Pushed: 2023-04-27T14:05:28.000Z (about 1 year ago)
• Last Synced: 2024-01-14T19:41:47.034Z (5 months ago)
• Language: Python
• Size: 2.29 MB
• Stars: 1
• Watchers: 1
• Forks: 2
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

Lists

• awesome-cell-cell-communication - CellEnBoost - [R]- A boosting-based ligand-receptor interaction identification model for cell-to-cell communication inference. (Uncategorized / Uncategorized)

README

        
# CellEnBoost

CellEnBoost: A boosting-based ligand-receptor interaction identification model for cell-to-cell communication inference

## Data

Data is available at [uniprot](https://www.uniprot.org/), [GEO](https://www.ncbi.nlm.nih.gov/geo/).

## Environment

Install python3 for running this code. And these packages should be satisfied:

* tensorflow == 1.14.0

* keras == 2.3.1

* pandas == 1.1.5

* numpy == 1.19.3

* scikit-learn == 0.24.0

## Usage

```

python main.py

```