https://github.com/MihirBafna/clarify

Multi-level Graph Autoencoder (GAE) to clarify cell cell interactions and gene regulatory network inference from spatially resolved transcriptomics
https://github.com/MihirBafna/clarify

cell-cell-interaction gene-regulatory-network graph-auto-encoder

Last synced: 4 months ago
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Multi-level Graph Autoencoder (GAE) to clarify cell cell interactions and gene regulatory network inference from spatially resolved transcriptomics

• Host: GitHub
• URL: https://github.com/MihirBafna/clarify
• Owner: MihirBafna
• Created: 2022-11-19T02:22:38.000Z (over 1 year ago)
• Default Branch: main
• Last Pushed: 2023-09-22T13:29:58.000Z (9 months ago)
• Last Synced: 2024-01-14T19:41:56.732Z (5 months ago)
• Topics: cell-cell-interaction, gene-regulatory-network, graph-auto-encoder
• Language: Jupyter Notebook
• Homepage: https://academic.oup.com/bioinformatics/article/39/Supplement_1/i484/7210503
• Size: 131 MB
• Stars: 3
• Watchers: 3
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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• awesome-cell-cell-communication - CLARIFY - [python]- Multi-level Graph Autoencoder (GAE) to clarify cell cell interactions and gene regulatory network inference from spatially resolved transcriptomics. (Uncategorized / Uncategorized)