https://github.com/Coolgenome/iTALK

https://github.com/Coolgenome/iTALK

Last synced: 4 months ago
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• Host: GitHub
• URL: https://github.com/Coolgenome/iTALK
• Owner: Coolgenome
• Created: 2018-12-12T15:00:08.000Z (over 5 years ago)
• Default Branch: master
• Last Pushed: 2019-08-02T19:19:39.000Z (almost 5 years ago)
• Last Synced: 2024-01-14T19:42:24.821Z (5 months ago)
• Language: R
• Size: 2.04 MB
• Stars: 53
• Watchers: 4
• Forks: 20
• Open Issues: 32
• Metadata Files:
  • Readme: README.md

Lists

• awesome-cell-cell-communication - iTALK - [R]- iTALK is an R toolkit for characterizing and illustrating intercellular communication. (Uncategorized / Uncategorized)

README

        
# iTALK

`iTALK` is an R toolkit for characterizing and illustrating intercellular communication, developed and maintained by [Linghua Wang lab](https://www.mdanderson.org/research/departments-labs-institutes/labs/linghua-wang-laboratory.html) at the University of Texas MD Anderson Cancer Center. `iTALK` can be used to visualize the complexity, diversity and dynamics of cell-cell communication in a wide range of biological processes. For more information, please refer to [our manuscript](https://www.biorxiv.org/content/early/2019/01/04/507871).

# Installation

To install the developmental version from GitHub:

```R

if(!require(devtools)) install.packages("devtools");

devtools::install_github("Coolgenome/iTALK", build_vignettes = TRUE)

```

To load the installed `iTALK` in R:

```R

library(iTALK)

```

# Citation

This package is intended for research use only. For any bugs, enhancement requests and other issues, please use the [`iTALK` GitHub issues tracker](https://github.com/Coolgenome/iTALk/issues) or email [Yuanxin Wang](mailto:[email protected]). If you find iTALK useful and use iTALK in your publication, please cite the paper: [iTALK: an R Package to Characterize and Illustrate Intercellular Communication](https://www.biorxiv.org/content/early/2019/01/04/507871)