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https://github.com/SyneRBI/SIRF

Main repository for the CCP SynerBI software
https://github.com/SyneRBI/SIRF

image-reconstruction medical-imaging pet-mr

Last synced: 12 days ago
JSON representation

Main repository for the CCP SynerBI software

Host: GitHub
URL: https://github.com/SyneRBI/SIRF
Owner: SyneRBI
License: other
Created: 2016-11-26T14:19:12.000Z (over 7 years ago)
Default Branch: master
Last Pushed: 2024-02-26T17:24:56.000Z (4 months ago)
Last Synced: 2024-02-26T18:43:04.873Z (4 months ago)
Topics: image-reconstruction, medical-imaging, pet-mr
Language: C++
Homepage: http://www.ccpsynerbi.ac.uk
Size: 9.36 MB
Stars: 55
Watchers: 25
Forks: 29
Open Issues: 144
Metadata Files:
- Readme: README.md
- Changelog: CHANGES.md
- Contributing: CONTRIBUTING.md
- License: LICENSE.txt
- Citation: CITATION.cff

Lists

awesome-medphys - SIRF - SIRF is a software toolkit for tomographic image reconstruction developed by the Synergistic Image Reconstruction Framework (SIRF) consortium. (Applications)

README

        # Synergistic Image Reconstruction Framework

[![gh-action-badge]][gh-action-link]

[![style-badge]][style-link]

[![zenodo-badge]][zenodo-link]

This software is the main output of [SyneRBI](https://www.ccpsynerbi.ac.uk), the Collaborative Computational 

Platform for Synergistic Reconstruction for Biomedical Imaging (formerly CCP PETMR).

Please start with our latest [User's Guide](doc/UserGuide.md).

## How to obtain SIRF

There are multiple ways to obtain a binary version of SIRF, please check them out in our documentation page [how to obtain SIRF](https://github.com/SyneRBI/SIRF/wiki/How-to-obtain-SIRF)

or [our Wiki page for installation instructions](https://github.com/SyneRBI/SIRF/wiki/Installation-instructions).

## Where is everything installed?

SIRF largely follows the usual directory structure with some minor tweaks. When using

the default options when building SIRF, you will get (most of the) following, depending

what was found/built:

```

/

    bin/            # executables

    lib/            # libraries

    python/         # Python files

    matlab/         # MATLAB files

    share/SIRF-V.v/ # versioned location (e.g. SIRF-3.0)

       doc/         # doxumentation

          doxygen/  # C++ documentation files generated by doxygen

          examples/ # example scripts

       data/        # data used in example scripts

```

[coveralls-badge]: https://coveralls.io/repos/github/CCPPETMR/SIRF/badge.svg?branch=master

[coveralls]: https://coveralls.io/github/CCPPETMR/SIRF?branch=master

[codecov-badge]: https://codecov.io/gh/SyneRBI/SIRF/branch/master/graph/badge.svg

[codecov]: https://codecov.io/gh/SyneRBI/SIRF

[gh-action-badge]: https://github.com/SyneRBI/SIRF/actions/workflows/build-test.yml/badge.svg

[gh-action-link]: https://github.com/SyneRBI/SIRF/actions/workflows/build-test.yml

[travis-badge]: https://travis-ci.org/SyneRBI/SIRF.svg?branch=master

[travis]: https://travis-ci.org/SyneRBI/SIRF

[style-badge]: https://app.codacy.com/project/badge/Grade/392861b4085f4f438d12c41029f86b47

[style-link]: https://app.codacy.com/gh/SyneRBI/SIRF/dashboard?utm_source=gh&utm_medium=referral&utm_content=&utm_campaign=Badge_grade

[zenodo-badge]: https://zenodo.org/badge/DOI/10.5281/zenodo.2707911.svg

[zenodo-link]: https://doi.org/10.5281/zenodo.2707911