https://github.com/ostrokach/proteinsolver

Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
https://github.com/ostrokach/proteinsolver

bioinformatics graph-neural-networks protein protein-design protein-sequence protein-structure structural-biology

Last synced: 15 days ago
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Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.

• Host: GitHub
• URL: https://github.com/ostrokach/proteinsolver
• Owner: ostrokach
• License: mit
• Created: 2020-04-08T17:37:19.000Z (about 4 years ago)
• Default Branch: master
• Last Pushed: 2021-03-24T20:11:07.000Z (over 3 years ago)
• Last Synced: 2024-03-02T15:34:40.528Z (4 months ago)
• Topics: bioinformatics, graph-neural-networks, protein, protein-design, protein-sequence, protein-structure, structural-biology
• Language: Jupyter Notebook
• Homepage: http://proteinsolver.org
• Size: 271 MB
• Stars: 49
• Watchers: 2
• Forks: 8
• Open Issues: 3
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Lists

• awesome-protein-design-software - ProteinSolver - [paper](https://doi.org/10.1016/j.cels.2020.08.016) - [<img src="https://colab.research.google.com/assets/colab-badge.svg">](https://colab.research.google.com/github/ostrokach/proteinsolver/blob/master/notebooks/20_protein_demo.ipynb) (Design)