https://github.com/XiaoTaoWang/TADLib

A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains
https://github.com/XiaoTaoWang/TADLib

bioinformatics chromatin contact-matrix cooler genomics hi-c python tad tads

Last synced: 10 days ago
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A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains

• Host: GitHub
• URL: https://github.com/XiaoTaoWang/TADLib
• Owner: XiaoTaoWang
• License: gpl-3.0
• Created: 2014-11-25T12:24:49.000Z (over 9 years ago)
• Default Branch: master
• Last Pushed: 2022-08-04T14:56:57.000Z (almost 2 years ago)
• Last Synced: 2024-06-15T04:54:20.480Z (27 days ago)
• Topics: bioinformatics, chromatin, contact-matrix, cooler, genomics, hi-c, python, tad, tads
• Language: Python
• Homepage:
• Size: 11.1 MB
• Stars: 39
• Watchers: 3
• Forks: 11
• Open Issues: 10

Lists

• awesome-HiC - HiTAD - A python library and has a comprehensive documentation for all the functions. (Topologically-Associated Domains identification)