https://github.com/chanzuckerberg/shasta

[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads
https://github.com/chanzuckerberg/shasta

assembly de-novo dna long-read nanopore pacbio sequencing

Last synced: 3 months ago
JSON representation

[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads

• Host: GitHub
• URL: https://github.com/chanzuckerberg/shasta
• Owner: chanzuckerberg
• License: other
• Archived: true
• Created: 2018-05-07T14:10:53.000Z (about 6 years ago)
• Default Branch: master
• Last Pushed: 2022-10-13T15:46:13.000Z (over 1 year ago)
• Last Synced: 2024-03-22T11:09:40.334Z (3 months ago)
• Topics: assembly, de-novo, dna, long-read, nanopore, pacbio, sequencing
• Language: C++
• Homepage:
• Size: 11.2 MB
• Stars: 269
• Watchers: 23
• Forks: 56
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE

Lists

• Awesome-LatchBio - shasta
• awesome-microbes - Shasta - [C++] - The goal of the Shasta long read assembler is to rapidly produce accurate assembled sequence using as input DNA reads generated by Oxford Nanopore flow cells. (Long-read Sequencing Tools)
• awesome-nanopore - Shasta - [C] - Very fast and capable nanopore assembler (Software packages / Genome Assembly)

README

        
# Shasta long read assembler

### This repository is no longer in use

**The project has moved to

[github.com/paoloshasta/shasta](https://github.com/paoloshasta/shasta).**

Shasta development continues in the

[new repository](https://github.com/paoloshasta/shasta).

New Shasta releases will appear in the

[Releases](https://github.com/paoloshasta/shasta/releases) page of the new repository.

Old Shasta releases (up to 0.10.0) continue to be available in the

[Releases](https://github.com/chanzuckerberg/shasta/releases) page of this repository.

For questions, issues, and discussion on any version of Shasta, please use the

[Issues page](https://github.com/paoloshasta/shasta/issues)

of the new repository.

[Here](OLD-README.md)

is the old README file for this repository. It is now obsolete.