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https://github.com/aertslab/cisTopic
cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data
https://github.com/aertslab/cisTopic
Last synced: about 1 month ago
JSON representation
cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data
- Host: GitHub
- URL: https://github.com/aertslab/cisTopic
- Owner: aertslab
- Created: 2018-05-23T08:37:13.000Z (about 6 years ago)
- Default Branch: master
- Last Pushed: 2024-04-05T08:26:57.000Z (3 months ago)
- Last Synced: 2024-04-05T09:24:37.788Z (3 months ago)
- Language: HTML
- Homepage:
- Size: 187 MB
- Stars: 131
- Watchers: 13
- Forks: 29
- Open Issues: 6
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Metadata Files:
- Readme: README.md
Lists
- awesome-atac-analysis - cisTopic
- awesome-single-cell - cisTopic - [R/python] - A probabilistic framework used to simultaneously discover coaccessible enhancers and stable cell states from sparse single-cell epigenomics data. [cisTopic: cis-regulatory topic modeling on single-cell ATAC-seq data](https://www.nature.com/articles/s41592-019-0367-1) (Software packages / Epigenomics)
- awesome-single-cell - cisTopic - [R] - A probabilistic framework used to simultaneously discover coaccessible enhancers and stable cell states from sparse single-cell epigenomics data. https://www.nature.com/articles/s41592-019-0367-1 (Software packages / Epigenomics)
- awesome-cellular-programs - cisTopic - [R] - A probabilistic framework used to simultaneously discover coaccessible enhancers and stable cell states from sparse single-cell epigenomics data. https://www.nature.com/articles/s41592-019-0367-1 (Software packages / ATAC-seq)