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https://github.com/zji90/SCATE
SCATE: Single-cell ATAC-seq Signal Extraction and Enhancement
https://github.com/zji90/SCATE
Last synced: about 1 month ago
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SCATE: Single-cell ATAC-seq Signal Extraction and Enhancement
- Host: GitHub
- URL: https://github.com/zji90/SCATE
- Owner: zji90
- License: mit
- Created: 2020-03-26T11:48:24.000Z (over 4 years ago)
- Default Branch: master
- Last Pushed: 2020-10-15T16:43:27.000Z (over 3 years ago)
- Last Synced: 2024-01-13T08:26:19.768Z (6 months ago)
- Language: R
- Homepage:
- Size: 154 MB
- Stars: 7
- Watchers: 2
- Forks: 2
- Open Issues: 0
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Metadata Files:
- Readme: README.html
- License: LICENSE
Lists
- awesome-atac-analysis - SCATE
- awesome-single-cell - SCATE - [R] - SCATE reconstructs activities of individual cis-regulatory elements (CREs) from single-cell ATAC-seq data by adaptively integrating information from co-activated CREs, similar cells, and publicly available regulome data. [Single-cell ATAC-seq signal extraction and enhancement with SCATE](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-020-02075-3) (Software packages / Epigenomics)